Gloeophyllum trabeum: GLOTRDRAFT_140562
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Entry
GLOTRDRAFT_140562 CDS
T03130
Name
(RefSeq) vacuolar assembling/sorting protein VPS16
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr04138
Autophagy - yeast
gtr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
GLOTRDRAFT_140562
04148 Efferocytosis
GLOTRDRAFT_140562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gtr04131
]
GLOTRDRAFT_140562
Membrane trafficking [BR:
gtr04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
GLOTRDRAFT_140562
Hops complex
GLOTRDRAFT_140562
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
19304559
NCBI-ProteinID:
XP_007869321
JGI:
Glotr1_1_140562
UniProt:
S7PXA4
LinkDB
All DBs
Position
Unknown
AA seq
846 aa
AA seq
DB search
MPDHPTASWQAMQDANVFYRRQQIYSIPGKLPNLDDYKVAACRYGGPLALMRDNDKLVAL
GRATPVFAKAQIQVFSPAGEGLLIFSWEQARIVRFGWTGDERLVVLNEEGVYRIYDLQGE
YEQYSLGSEVAEIGVEDAKIHDNGLVALTNSLTFLEVRGWSGGKPVTLANPGLSQPPSSW
TIIPPELTISRHVEVLLSVESTIYTVDNLENTDQRISRGPFTHMASSPNGKSLALLTFAG
LLLVVSADFQRNLAEFDTTNVPGAEGSVRQVEWCGNDAILVTWDNLALMVGPFGDTLQFF
YSGPTFAVTEVDGVRVVGPDVCDFIQKVPASTVSVFRPGSTSPSAILYDAWENFAKRSPK
ADESIRSIRPELGRAVDECIDAAGQEWEPYWQRRLLNAAKFGRSFLDLYDPTDFINMGQS
LKVLNAVRDYQIGIPITYTQYIHASPAQLVSRLTARNLHLLALRISTYLSLKPDPVLKHW
ACAKILRSKPSATGSGKNAELTGDSEVCRMIVDKFEKLGGGGVSYADIAKKAWEVGRTSL
ATKLLDYEPRASDQVPLLLSMKEDRLALAKAVDSGDPDLVYHVLLHLQKSMSLGSFFRLL
EDGGEQLAPATRLLQVYAREQNRDMLRDFYYSDDRRVESAVLLLEEASNMTDPTAKINTV
KAAQKFFSEDKERGFEAKMMDESVRLLTAQQQLEKDADGKIPFFGLSVNETIRTCLLNGM
SKKADKIKSDFKVPDKRFWYIKLYALTAMRDFEGLDAFAKSKRSPIGYEAFVRHLVEKGH
QKEAAGYVARCDASKRVDLYVQCGEWRMAGKECKDRGDKAKLDQLRRTCPNSLIARELEQ
IATSMK
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgccagatcatccaacggcgtcatggcaggcgatgcaagacgccaatgtcttttacagg
cgacagcagatctactctattcccggaaagctacctaacttggacgattacaaggtagcc
gcatgccgctatggtggtcctctagccttgatgagggataatgacaagttggtcgcgctg
ggtcgtgccacgcctgtattcgcaaaggcgcagattcaggtgttctcgcccgcgggagaa
ggcttgctgatcttcagttgggaacaagccaggatcgtgcgctttgggtggacgggagac
gagaggctggtcgtactaaatgaagagggcgtctatcggatctacgacttacaaggcgag
tacgaacagtattcgctggggtcagaggtcgcggaaataggggtggaggatgcgaagata
catgacaatggtctcgttgctctcacgaactctttgacattcctcgaggtcagaggctgg
tcgggaggaaagcctgtgactctagcaaatcctggcctatcccagccgccgagctcatgg
accatcatcccccccgagctcaccatctcgcggcatgtcgaagtcctcttgtccgtcgaa
tccacgatctacaccgtcgacaacctcgagaacaccgaccagcgcatatctcgtgggccg
ttcacccacatggcctcttctccgaacggcaagtcgctcgcgctgctcaccttcgcaggg
ctgctgctcgtcgtctcggccgatttccagcggaacctcgccgagttcgacacgacgaat
gtccccggcgcggaggggtcggtacgccaggtggagtggtgcggaaacgatgctatcctt
gttacgtgggacaacctggctctgatggtcgggccttttggtgataccttacagttcttc
tactccggaccgacattcgccgtgactgaagtcgacggggtccgcgtcgtcggtccggac
gtctgtgactttatacagaaggtaccagcatcgactgtttctgtgtttcggccggggtct
acatcgccttcggccatcttgtacgacgcatgggagaactttgcaaagcgctcgccgaag
gcagacgagagcatccggagcatacgcccggaactagggcgtgcggtggatgagtgtatc
gatgcagcgggacaggagtgggagccgtattggcagcgccgactcctcaatgccgcgaaa
ttcgggcgcagtttcttggacctgtatgacccgaccgactttattaacatgggccagtca
ctcaaggtcctcaacgccgttcgggactatcaaattggcatacccatcacgtatacacaa
tacatccacgcatccccggcccaactcgtctcccgcctcacagcgcgcaatctacacctc
ctcgctctccgcatatccacgtacctctcgctgaaacccgaccccgtgctcaaacactgg
gcgtgcgcgaagatcctgcggtcgaagccgtccgcgacaggctccggcaagaacgcggag
ctcaccggggacagcgaggtgtgcaggatgatcgtggacaagttcgagaagctcggaggc
ggcggggtgagttatgcggatattgcaaagaaggcgtgggaggtagggcggacgagtctc
gccacgaagctgctggattacgagccgcgggcctcggaccaggtcccgttgctcctcagc
atgaaagaggatcggcttgcccttgcgaaggctgtggacagcggggacccagatcttgtc
tatcatgttttactgcatttgcagaagagcatgtcacttggctccttcttccgtctttta
gaagatggtggagagcagctagcgcctgcgacgcgattgctgcaagtgtatgcacgagag
cagaaccgggacatgctcagagatttctattactctgatgaccgacgagtggagagcgca
gtccttttattggaggaggcatcgaatatgactgatcctacagcaaaaattaatacggtg
aaagcagctcaaaagttcttctctgaggataaggagcgtggctttgaggccaagatgatg
gatgagagcgttcgtttgctaacggcgcaacagcagttggagaaggacgccgatggcaaa
atccccttcttcggtcttagcgtgaacgaaacgataaggacatgccttctgaacggtatg
tcgaagaaagcagataagatcaagtcggacttcaaggtccctgacaaacgcttctggtac
atcaagctatacgcattaactgctatgcgtgacttcgaaggcctagatgcgtttgcgaag
tccaagcgtagccctatcgggtacgaggctttcgttcgccatctcgtcgagaagggtcat
cagaaggaagcggccggatacgtcgctcgttgtgatgcgagcaagcgtgtggacctttat
gttcaatgtggggaatggagaatggccgggaaggagtgcaaagacagaggtgataaggcg
aagctggaccaacttcggaggacgtgtcctaactcacttatagcaagggagctggagcag
atagcaacttctatgaagtag
DBGET
integrated database retrieval system
