Gloeophyllum trabeum: GLOTRDRAFT_140654
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Entry
GLOTRDRAFT_140654 CDS
T03130
Name
(RefSeq) hypothetical protein
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GLOTRDRAFT_140654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gtr03021
]
GLOTRDRAFT_140654
Transcription machinery [BR:
gtr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
GLOTRDRAFT_140654
Prokaryotic type
Archaeal type
TFE
GLOTRDRAFT_140654
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
zf-C4_ClpX
Zn_Ribbon_TF
Zn_Ribbon_YjdM
zf_UBZ
Zn_ribbon_TFIIB
Zn_ribbon_IS1595
zf_Tbcl_Rhp7
zf-C2H2_6
SVIP
Motif
Other DBs
NCBI-GeneID:
19304582
NCBI-ProteinID:
XP_007869436
JGI:
Glotr1_1_140654
UniProt:
S7PXM5
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MSTKEEQETLRLLVQHVSRSFYEPKYIVIMDQLARHPVLKDDDLAGRMGLQAKELNKLMA
VLNNDRLIRVHRQNELKEGAQRSVGRAYYYIDYQHFCNVVKWRVAEMRRIIDNSLRNELD
NKGYICPQCNKSFTPLEVDKLIDFSRGVFICDDCKGELVDNENAESVRGSQDRMQRFNRQ
MAFIREGLRKTEDMVLPAFDVEAWVRNNLSEAEKQRNADAGAGLKIAGSGPKTEDAGIGV
VMSLDKDEETRIQERNAEAAAKRQQNLMPSWHLKSTITGDLTALGEAENNRAPNGSSSLP
GGTVLSSNDAILRGLAPLNPTPTAPVVEDIKPVQTQEADYYDQYYASLEASNAASSQGTP
SAYGYSNGVNGADEEEEDVKPSIEYLDSLNEYRKRSRPEQVDVAAEMRKSARLDEEGNRG
TYTVEAVAPVEAAAEAAEIEVDATDDPLVQVNGQPVRYSEVTEEHQEMMTPEEYQAYYEI
MQARS
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgaaagaagaacaagagacccttcgtctccttgttcagcatgtctctcgctct
ttctacgagccgaaatatattgtaataatggatcagctagctagacatccagttctgaaa
gatgacgacttggcaggaaggatgggcctccaggcgaaagagctcaacaagctcatggca
gttctcaataatgaccggttgattcgggtccatcgtcagaatgagctgaaggagggggcc
cagcggtctgtgggcagggcttactactacatcgactaccagcatttctgcaatgtggtc
aagtggcgtgtagcggaaatgcgacgcattattgataattcgcttcgaaacgaactcgat
aataaagggtacatctgccctcagtgcaacaagtcctttacacctttggaggtcgacaaa
ctcatcgacttctcgcgtggcgttttcatatgcgatgattgcaagggggagttggtcgat
aatgaaaatgcggagagcgtcaggggaagtcaagatcgaatgcagaggttcaacaggcag
atggctttcattcgggaagggctgaggaagaccgaggacatggtgttacctgcgtttgac
gttgaagcatgggttaggaataacctgagcgaggccgagaaacaacgaaatgccgacgca
ggagccgggcttaagatcgcaggctcaggccccaagacagaagacgctggcattggtgtg
gttatgtctcttgacaaagacgaggagacgcggattcaggagagaaacgctgaagcagca
gccaagcggcagcagaatttgatgccgtcttggcatctcaagagtacaattacgggcgat
ctgactgcattgggtgaggctgagaacaatcgagcacctaatggcagtagctctctacca
ggaggcaccgtccttagctcaaacgatgccatcttgagagggttggccccgttgaatccg
acgccgaccgcgcctgtagtagaggacatcaagccagtgcagacgcaagaggcagattac
tatgatcagtactatgcctctcttgaggcttcaaacgcagcgtcttcgcaaggtacacct
tcggcatatggttacagcaacggggtaaatggcgccgacgaggaagaagaggatgtgaag
ccttccattgaatatttggattcattaaacgaatacagaaagcgatccagaccggagcag
gtcgatgttgctgcggagatgaggaagtcggcaaggctggatgaggaaggaaaccgggga
acgtacaccgttgaggcagttgctcctgtggaagcagccgcagaagctgcggaaatagaa
gtagatgctacagatgacccccttgtgcaagtaaatggccagcctgtccgatattcagag
gtcacagaggaacatcaagagatgatgacccccgaggagtaccaggcatactatgagatt
atgcaagcccggtcatag
DBGET
integrated database retrieval system