Gloeophyllum trabeum: GLOTRDRAFT_140812
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Entry
GLOTRDRAFT_140812 CDS
T03130
Name
(RefSeq) WD40 repeat-like protein
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
GLOTRDRAFT_140812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gtr04121
]
GLOTRDRAFT_140812
03036 Chromosome and associated proteins [BR:
gtr03036
]
GLOTRDRAFT_140812
Ubiquitin system [BR:
gtr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
GLOTRDRAFT_140812
Chromosome and associated proteins [BR:
gtr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
GLOTRDRAFT_140812
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_C
EIF3I
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_WDR41
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_EML
ASA1
Beta-prop_DCAF4
F-box-like
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WDR90_beta-prop_4th
TRM82_WD
F-box
NBCH_WD40
ANAPC4_WD40
Beta-prop_Nup120_160
WDR54
Beta-prop_ACSF4
PAC11
WD40_RFWD3
WD40_like
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
19304619
NCBI-ProteinID:
XP_007869747
JGI:
Glotr1_1_140812
UniProt:
S7PWV1
LinkDB
All DBs
Position
Unknown
AA seq
720 aa
AA seq
DB search
MLSPSSSSPPQRLPTKQTLRNTLPRSSSSPYASSSTSSNNEPDAPRFTRLLGTVLGSPFV
TTADVPNAEPEGRRSPSTDARDDVVLVDGAFSAVPRNLTVTRPSSPAPTMDFSLISRPTS
MVQMTSDDHQIDVYGYGHEHDKSCSFFTSPSARSRFDRISPSRSAKGFLPRIWDALSSPG
KKGKGKAAYTVTTFDYSDLPPLDGEEGELIDEACYIDALAVTGIDILSRLPPEIALYLLL
FLDLPSILACLSVSHTWRTLATDNGVWKELFYQKAGWQIDLDRAWVRGWDGQRFVCRASP
GSVAISRSSSNVTGGWVSRTPSFGGESRVSAGEGRGRRRATALLSVPAIASAPSWSGATL
TPGSLAPLSLDWRALYRARLELEKKWTSGEPRVTRISGHTDSVYCLEFDSSRIITGSRDR
SIKVWSLRTGKLLGTFRGHAGSVLCLKFDKDWDVGALSDEEEKAGMRKGFMVSGSSDCSV
CVWDLWSSAGAGVGKRASAASGLAHGEVRAEVKAVLRGHTGGVLDLRIDGEWIVSCSKDA
LIRVWNRETLSLHTTFRGHEGPVNAVGLQAGKVVSASGDGKMMLWDILSGERLRTFEGHD
RGLACIEFKDDLIVSGSNDCKIKVWSATTGECLRTLVGHDLLVRALSFDPQSGRLVSASY
DRTVKVWDLRTGRMLREFRNSHVSHIFDVKFDVSRIVSTSHDQKIVVLDFGQDIDTALFV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgctctctccctcatcgtcctcgccgccgcaaaggctgccaacgaagcagactctgcgg
aacaccctcccgcgctcgtcgtcgtcgccgtacgcatcgagctcgacgtccagcaacaac
gagcccgacgccccccgcttcactcgcctcctcggcaccgtccttgggtcgcccttcgtc
accaccgcagacgtcccaaacgccgagcctgagggccggcgcagccccagcacagacgca
cgcgacgatgtcgtcttggttgacggcgccttttctgctgtgccgcggaacctcactgtc
acccgcccgtcatcgcccgcaccgaccatggacttctcgctcatcagccggccgacctcg
atggtgcagatgaccagcgacgaccaccagattgatgtctacggctatgggcacgagcac
gacaagagctgctctttcttcacctcgccgtcagccaggagtcgcttcgatcgcatatca
ccctcgcgctccgcaaaaggcttcctgcctcgcatatgggatgcactgagttccccgggg
aagaaggggaaaggaaaagcggcgtatactgtcactaccttcgactacagcgacctgccg
ccactggatggtgaggaaggggagctcattgacgaggcgtgctatatagacgcgctggct
gtgactggtatagacatcctctcccgcctcccgcccgagatcgcgctgtacctcctcctc
ttcctcgacctcccctcgatccttgcgtgccttagcgtctcgcacacctggcgcacgctc
gcgacggacaacggcgtgtggaaggagctgttctaccagaaggccggctggcagatcgac
ctcgaccgtgcttgggtgcgcgggtgggacgggcagcgctttgtttgtcgcgcgagcccc
ggctccgttgccatctcgaggtcgagcagtaatgtcacaggcgggtgggtgtccagaaca
ccaagctttggcggagagagtagagtgagtgcgggagagggaagggggaggcggagggcg
acggcgctgctgagtgtgccggcgattgcgtctgcgccgagctggagcggggcgacgctc
acgccggggagtctggcgccattgtcgttggattggagagcgctgtacagggcgcggctg
gagctggagaagaagtggacgagcggggagccgcgggtgacgcggatatcggggcacacg
gacagtgtgtactgtctggaattcgactcgtcacggattatcacaggctcacgcgaccgt
tcgatcaaggtgtggtcgctgcgcacggggaagctgctgggcacgttccgcgggcacgcc
gggagcgtgctctgcctcaagttcgacaaggactgggacgtcggggcgctctcggacgag
gaggaaaaggcggggatgcgcaaggggttcatggtcagcgggagcagcgactgctcggtg
tgcgtgtgggatttgtggtcaagcgcgggcgcgggtgtagggaagcgggcgagtgccgcg
tctggcctggcccatggcgaggtgagggcggaggtcaaggcggtgttgaggggacatacg
gggggcgtgttggatctgaggattgatggcgagtggattgtgagctgttcgaaggatgct
ctgatccgcgtgtggaatcgggagacactgtcgttgcacactacgttccgcggacatgaa
gggcctgtgaacgccgttgggctgcaggcggggaaggtcgtcagcgccagtggagatggg
aagatgatgctctgggatattctctccggggaacgcctccggaccttcgagggccacgat
cggggtctcgcgtgtatcgagttcaaggacgacttgatcgtctccggctcgaacgactgc
aaaatcaaggtgtggtccgcgacgacgggcgagtgcctgcgcacgctcgtcggccacgac
ctgctcgtacgcgctctctcgttcgacccccagagcggtcgcctcgtcagcgcgagctac
gaccgcaccgtgaaggtgtgggacttgcgcacggggcggatgctgcgcgagtttaggaac
agccatgtcagccatatattcgacgtcaagtttgatgtgagcaggatcgtgagcacgtcg
catgaccagaagattgtggtccttgactttgggcaagacatcgacacagcgctattcgtg
tag
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integrated database retrieval system