KEGG   Gloeophyllum trabeum: GLOTRDRAFT_140812
Entry
GLOTRDRAFT_140812 CDS       T03130                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K03362  F-box and WD-40 domain protein 1/11
Organism
gtr  Gloeophyllum trabeum
Pathway
gtr04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:gtr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    GLOTRDRAFT_140812
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gtr04121]
    GLOTRDRAFT_140812
   03036 Chromosome and associated proteins [BR:gtr03036]
    GLOTRDRAFT_140812
Ubiquitin system [BR:gtr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     GLOTRDRAFT_140812
Chromosome and associated proteins [BR:gtr03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     GLOTRDRAFT_140812
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_C EIF3I WD40_CDC20-Fz WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st WDR55 Beta-prop_WDR41 Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 DSE1_N WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_EML ASA1 Beta-prop_DCAF4 F-box-like Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 WDR90_beta-prop_4th TRM82_WD F-box NBCH_WD40 ANAPC4_WD40 Beta-prop_Nup120_160 WDR54 Beta-prop_ACSF4 PAC11 WD40_RFWD3 WD40_like PEP5_VPS11_N
Other DBs
NCBI-GeneID: 19304619
NCBI-ProteinID: XP_007869747
JGI: Glotr1_1_140812
UniProt: S7PWV1
LinkDB
Position
Unknown
AA seq 720 aa
MLSPSSSSPPQRLPTKQTLRNTLPRSSSSPYASSSTSSNNEPDAPRFTRLLGTVLGSPFV
TTADVPNAEPEGRRSPSTDARDDVVLVDGAFSAVPRNLTVTRPSSPAPTMDFSLISRPTS
MVQMTSDDHQIDVYGYGHEHDKSCSFFTSPSARSRFDRISPSRSAKGFLPRIWDALSSPG
KKGKGKAAYTVTTFDYSDLPPLDGEEGELIDEACYIDALAVTGIDILSRLPPEIALYLLL
FLDLPSILACLSVSHTWRTLATDNGVWKELFYQKAGWQIDLDRAWVRGWDGQRFVCRASP
GSVAISRSSSNVTGGWVSRTPSFGGESRVSAGEGRGRRRATALLSVPAIASAPSWSGATL
TPGSLAPLSLDWRALYRARLELEKKWTSGEPRVTRISGHTDSVYCLEFDSSRIITGSRDR
SIKVWSLRTGKLLGTFRGHAGSVLCLKFDKDWDVGALSDEEEKAGMRKGFMVSGSSDCSV
CVWDLWSSAGAGVGKRASAASGLAHGEVRAEVKAVLRGHTGGVLDLRIDGEWIVSCSKDA
LIRVWNRETLSLHTTFRGHEGPVNAVGLQAGKVVSASGDGKMMLWDILSGERLRTFEGHD
RGLACIEFKDDLIVSGSNDCKIKVWSATTGECLRTLVGHDLLVRALSFDPQSGRLVSASY
DRTVKVWDLRTGRMLREFRNSHVSHIFDVKFDVSRIVSTSHDQKIVVLDFGQDIDTALFV
NT seq 2163 nt   +upstreamnt  +downstreamnt
atgctctctccctcatcgtcctcgccgccgcaaaggctgccaacgaagcagactctgcgg
aacaccctcccgcgctcgtcgtcgtcgccgtacgcatcgagctcgacgtccagcaacaac
gagcccgacgccccccgcttcactcgcctcctcggcaccgtccttgggtcgcccttcgtc
accaccgcagacgtcccaaacgccgagcctgagggccggcgcagccccagcacagacgca
cgcgacgatgtcgtcttggttgacggcgccttttctgctgtgccgcggaacctcactgtc
acccgcccgtcatcgcccgcaccgaccatggacttctcgctcatcagccggccgacctcg
atggtgcagatgaccagcgacgaccaccagattgatgtctacggctatgggcacgagcac
gacaagagctgctctttcttcacctcgccgtcagccaggagtcgcttcgatcgcatatca
ccctcgcgctccgcaaaaggcttcctgcctcgcatatgggatgcactgagttccccgggg
aagaaggggaaaggaaaagcggcgtatactgtcactaccttcgactacagcgacctgccg
ccactggatggtgaggaaggggagctcattgacgaggcgtgctatatagacgcgctggct
gtgactggtatagacatcctctcccgcctcccgcccgagatcgcgctgtacctcctcctc
ttcctcgacctcccctcgatccttgcgtgccttagcgtctcgcacacctggcgcacgctc
gcgacggacaacggcgtgtggaaggagctgttctaccagaaggccggctggcagatcgac
ctcgaccgtgcttgggtgcgcgggtgggacgggcagcgctttgtttgtcgcgcgagcccc
ggctccgttgccatctcgaggtcgagcagtaatgtcacaggcgggtgggtgtccagaaca
ccaagctttggcggagagagtagagtgagtgcgggagagggaagggggaggcggagggcg
acggcgctgctgagtgtgccggcgattgcgtctgcgccgagctggagcggggcgacgctc
acgccggggagtctggcgccattgtcgttggattggagagcgctgtacagggcgcggctg
gagctggagaagaagtggacgagcggggagccgcgggtgacgcggatatcggggcacacg
gacagtgtgtactgtctggaattcgactcgtcacggattatcacaggctcacgcgaccgt
tcgatcaaggtgtggtcgctgcgcacggggaagctgctgggcacgttccgcgggcacgcc
gggagcgtgctctgcctcaagttcgacaaggactgggacgtcggggcgctctcggacgag
gaggaaaaggcggggatgcgcaaggggttcatggtcagcgggagcagcgactgctcggtg
tgcgtgtgggatttgtggtcaagcgcgggcgcgggtgtagggaagcgggcgagtgccgcg
tctggcctggcccatggcgaggtgagggcggaggtcaaggcggtgttgaggggacatacg
gggggcgtgttggatctgaggattgatggcgagtggattgtgagctgttcgaaggatgct
ctgatccgcgtgtggaatcgggagacactgtcgttgcacactacgttccgcggacatgaa
gggcctgtgaacgccgttgggctgcaggcggggaaggtcgtcagcgccagtggagatggg
aagatgatgctctgggatattctctccggggaacgcctccggaccttcgagggccacgat
cggggtctcgcgtgtatcgagttcaaggacgacttgatcgtctccggctcgaacgactgc
aaaatcaaggtgtggtccgcgacgacgggcgagtgcctgcgcacgctcgtcggccacgac
ctgctcgtacgcgctctctcgttcgacccccagagcggtcgcctcgtcagcgcgagctac
gaccgcaccgtgaaggtgtgggacttgcgcacggggcggatgctgcgcgagtttaggaac
agccatgtcagccatatattcgacgtcaagtttgatgtgagcaggatcgtgagcacgtcg
catgaccagaagattgtggtccttgactttgggcaagacatcgacacagcgctattcgtg
tag

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