Gloeophyllum trabeum: GLOTRDRAFT_140854
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Entry
GLOTRDRAFT_140854 CDS
T03130
Name
(RefSeq) DNA repair exonuclease
KO
K10865
double-strand break repair protein MRE11
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03440
Homologous recombination
gtr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GLOTRDRAFT_140854
03450 Non-homologous end-joining
GLOTRDRAFT_140854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gtr03032
]
GLOTRDRAFT_140854
03400 DNA repair and recombination proteins [BR:
gtr03400
]
GLOTRDRAFT_140854
DNA replication proteins [BR:
gtr03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
GLOTRDRAFT_140854
DNA repair and recombination proteins [BR:
gtr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
GLOTRDRAFT_140854
BRCA1-C complex
GLOTRDRAFT_140854
NHEJ (non-homologous end-joining)
MRX complex
GLOTRDRAFT_140854
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
Motif
Other DBs
NCBI-GeneID:
19304630
NCBI-ProteinID:
XP_007869808
JGI:
Glotr1_1_140854
UniProt:
S7RCJ6
LinkDB
All DBs
Position
Unknown
AA seq
716 aa
AA seq
DB search
MSEHGGNEDHQDISPEMRVPVEEETIKILLATDNHIGYNERDPIRGQDSINTFKEILQLA
VKHDVDLILLGGDLFHENRPSRDTLFQVMALLREYTLGDKPIQIELLSDPDDGKPPGFPF
PAINYEDPNFNVAIPVFSIHGNHDDPQGAGPEGALCALDLLSAAGLVNYMGKFDLPLNDK
EAQNTGIAIKPVLLRKGTTKLGMYGVGNVKDQRMHFELRSNRVRMFMPRDKDNWFNILII
HQNRVKHGPQEFVPEGMFDDSIDLVIWGHEHDCRIVPEPVPGKKYYICQPGSSVATSLAD
GESLEKHVALLQIQGKEFQLTPIPLRTVRPFVLDEVVLSEEAETGGFDLTDQMEITKYLK
SRVNALIDQANTLWDERNSRAVEEGEDELPRMLPLVRLKVDTTGVPEMSNPIRFGQEFSG
RIANPRDVLTFHRAKKTAGRSKVSIDQPELSIDDPELSISEKLSKVRVQTLVQEYLAAQE
LQLLAEGGMSDAIQVFVDKDDPHAIESHVKRTLKLLLKDVQANGDMEEEELEEALAKAKE
QQEKEHAEQERQAPSKTKGKGKATAEDSDASVDSMMMDVDAGGGSDFEALDDSDAPPRPK
KKAAAPKKTAAAAKKAPVRGRGKKAAVPSDDEDDDEVIDDDEEFSKPTKRTNRAAVLSQA
TAAKKPAAKKATTKTTANKQSTLSFAPSGAARTSRAAASRSRAKTAQVVEIDSDSD
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacatggaggcaacgaggaccaccaggacatatcccctgagatgcgggttcct
gtggaggaggagactattaagatacttctagcaactgataatcacattgggtacaatgag
agagatccaatacgaggccaggattctatcaacacgttcaaggagatcctgcagctggcc
gtcaagcacgacgtcgacctgatccttctcggaggcgacctctttcatgaaaaccgccca
tcacgagatacattgttccaagtcatggcacttttgcgtgaatacacattaggcgacaag
ccgatacaaatagaactgttgagtgaccctgatgacggtaaaccacctggattcccgttt
ccggcgataaactacgaggaccccaacttcaacgtcgctataccagtattttcgatccat
ggaaaccatgatgaccctcagggcgctggtcctgaaggcgcactatgtgcgctcgacctc
ctctcagccgcgggcttggttaattacatgggcaagttcgatttgcccctcaatgacaag
gaagcccaaaatactggtatcgcaataaaaccagtccttctgagaaagggcaccaccaag
ctgggtatgtacggcgtgggtaatgtcaaagaccaacgaatgcactttgagttgcggagt
aatcgggtcagaatgttcatgcctagagacaaggataactggttcaacattctcatcatc
caccaaaaccgagtaaaacatggtcctcaagaattcgtgcccgaaggcatgtttgacgat
agcatagatctcgtgatatggggacatgaacacgactgtcgcatcgtcccggagcctgtc
ccgggtaagaagtattacatatgtcagccaggctcctccgtcgcaacctccttggccgat
ggggagtcattagagaaacacgttgccctgctccaaatccagggcaaagagtttcaattg
actccgatacctctgcggacagtgcggcctttcgtcctggacgaggtcgtgctcagtgaa
gaggcggagactggcggtttcgacttaactgaccaaatggagatcacaaaatatctgaag
tcaagagtcaacgcccttattgaccaagccaatactctctgggatgagcgcaattcaaga
gccgtggaagaaggggaagacgagctcccgaggatgctgcccttggtccggctgaaggta
gacacaacaggcgttccggaaatgtccaaccccatccgcttcggtcaagaattctcaggg
cgcatcgcgaacccgcgggatgtgctcacctttcaccgcgccaagaagaccgcgggccgc
agcaaagtcagcatcgaccagccggagctgagcatcgacgaccctgagctgtccatctcg
gagaagctcagcaaggtgcgcgttcagacgctcgtgcaggagtaccttgcggcgcaggag
ctgcagctacttgcggagggcgggatgagcgatgccatacaggtgtttgtggataaggac
gatccgcatgcgatcgaatcgcatgtaaagaggacattgaagttgctgctcaaggacgtc
caggcgaacggggatatggaagaggaagagctagaggaagcgctcgccaaggctaaggaa
cagcaggagaaggagcatgctgaacaggaacgacaagcaccttcgaaaacgaagggtaaa
ggcaaggccaccgcagaggactcggatgcctccgtcgactccatgatgatggatgtagac
gcgggcggcgggtccgatttcgaggctctggacgactccgacgcgcctccacgacccaag
aagaaggcagccgcgccgaagaagacggccgcggcagccaagaaagcgcctgtgagaggt
agagggaagaaggctgccgtcccctcggacgacgaggatgacgacgaagtaatagacgac
gacgaagagttctccaaaccgaccaagcggacaaacagagcagcagtgttgagtcaagcc
acagccgccaagaagccagcagcaaaaaaggcgacgaccaagacgactgccaataaacaa
tcaacactaagcttcgcgccgtcgggcgctgcgcggacctcgagggcggcagcgtctcgg
tcgagagcaaagactgctcaagtggtcgagatcgacagcgacagtgattga
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