KEGG   Gloeophyllum trabeum: GLOTRDRAFT_31673
Entry
GLOTRDRAFT_31673  CDS       T03130                                 
Name
(RefSeq) Sm-like ribonucleo protein
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
gtr  Gloeophyllum trabeum
Pathway
gtr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gtr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GLOTRDRAFT_31673
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gtr03019]
    GLOTRDRAFT_31673
Messenger RNA biogenesis [BR:gtr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     GLOTRDRAFT_31673
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     GLOTRDRAFT_31673
SSDB
Motif
Pfam: LSM Hfq NPH-II
Other DBs
NCBI-GeneID: 19305407
NCBI-ProteinID: XP_007860269
JGI: Glotr1_1_31673
UniProt: S7QMZ3
LinkDB
Position
Unknown
AA seq 136 aa
MDSLIPFTTSGSLVDCVDRKMMVVLRDGRKLIGVLRSYDQFANLVLEDTVERIYHADVFA
ERWQGLYLIRGENVVLLGEIDLDQEDDVPLRQVEWNTLEPYHKEDIAAKKHREEYKANVL
YEQRGFCKEGGEGDGY
NT seq 411 nt   +upstreamnt  +downstreamnt
atggattcattaataccatttacaacctcgggatctcttgtggattgtgtggacagaaag
atgatggtggtattgagagacggccggaagttaattggtgtcctaaggtcatatgatcag
tttgcgaacctagttctcgaggatactgtggaacgcatataccatgcagatgtcttcgcg
gagaggtggcaaggactatacctcattcgcggggagaacgtagttctgcttggcgaaata
gatttggatcaggaagacgatgtgcccttgcgacaggttgagtggaatacgctcgaacca
taccacaaagaggacatcgccgcaaagaagcaccgggaagaatacaaggccaatgtgctg
tacgagcagaggggcttctgtaaagagggcggcgaaggtgacggatactga

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