Gloeophyllum trabeum: GLOTRDRAFT_31673
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Entry
GLOTRDRAFT_31673 CDS
T03130
Name
(RefSeq) Sm-like ribonucleo protein
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GLOTRDRAFT_31673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtr03019
]
GLOTRDRAFT_31673
Messenger RNA biogenesis [BR:
gtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
GLOTRDRAFT_31673
mRNA degradation factors
5'-3' decay
Lsm complex
GLOTRDRAFT_31673
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
NPH-II
Motif
Other DBs
NCBI-GeneID:
19305407
NCBI-ProteinID:
XP_007860269
JGI:
Glotr1_1_31673
UniProt:
S7QMZ3
LinkDB
All DBs
Position
Unknown
AA seq
136 aa
AA seq
DB search
MDSLIPFTTSGSLVDCVDRKMMVVLRDGRKLIGVLRSYDQFANLVLEDTVERIYHADVFA
ERWQGLYLIRGENVVLLGEIDLDQEDDVPLRQVEWNTLEPYHKEDIAAKKHREEYKANVL
YEQRGFCKEGGEGDGY
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atggattcattaataccatttacaacctcgggatctcttgtggattgtgtggacagaaag
atgatggtggtattgagagacggccggaagttaattggtgtcctaaggtcatatgatcag
tttgcgaacctagttctcgaggatactgtggaacgcatataccatgcagatgtcttcgcg
gagaggtggcaaggactatacctcattcgcggggagaacgtagttctgcttggcgaaata
gatttggatcaggaagacgatgtgcccttgcgacaggttgagtggaatacgctcgaacca
taccacaaagaggacatcgccgcaaagaagcaccgggaagaatacaaggccaatgtgctg
tacgagcagaggggcttctgtaaagagggcggcgaaggtgacggatactga
DBGET
integrated database retrieval system