KEGG   Gloeophyllum trabeum: GLOTRDRAFT_31741
Entry
GLOTRDRAFT_31741  CDS       T03130                                 
Name
(RefSeq) hypothetical protein
  KO
K03010  DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
Organism
gtr  Gloeophyllum trabeum
Pathway
gtr03020  RNA polymerase
gtr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    GLOTRDRAFT_31741
  09124 Replication and repair
   03420 Nucleotide excision repair
    GLOTRDRAFT_31741
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gtr03021]
    GLOTRDRAFT_31741
   03400 DNA repair and recombination proteins [BR:gtr03400]
    GLOTRDRAFT_31741
Enzymes [BR:gtr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     GLOTRDRAFT_31741
Transcription machinery [BR:gtr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     GLOTRDRAFT_31741
DNA repair and recombination proteins [BR:gtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      GLOTRDRAFT_31741
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 MRNIP SSXT
Other DBs
NCBI-GeneID: 19305410
NCBI-ProteinID: XP_007860272
JGI: Glotr1_1_31741
UniProt: S7S5X3
LinkDB
Position
Unknown
AA seq 1218 aa
TQDPYAYDDPNYGVEEEEDEYEEITQEDCWTVISSFFEQKGLVRQQLDSFDEFVQNTMQE
LVDENSDLILDQENQHTGHEADSTRRYEIKFGQIYLSRPTITEADGSVVPLFPQEARLRN
LTYSSTLYVDMKKRVLTSREDPDNPGETIWEPERGEVPEDTQKVWIGRVPIMLRSTFCIL
HDLQDQDLYDLNECPYDSGGYFIINGSEKVLIAQERMATNHVYVFAKAQPSPISFLAEIR
SAVEKGGKTISQFQVKMYHRNQERSLGSVMKATIPYIKVDIPIWVVFRALGVISDRDILE
HICYDMQDLQMLEMLKPCIDDGFVIQDREIALDFIGNRGTTTGLSRERRLRYAQEILQKE
MLPHVSMAEGSESKKAYFFGYMIHRLLLAALERRELDDRDHFGKKRLDLAGPLLANLFRM
LFRKLTKDVYRYLQKCVETHKEFNLSLAVKHNTITNGLKYSLATGNWGDQKKSMSSKAGV
SQVLNRYTYASTLSHLRRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQACGLVKNL
SLMACISVGSLSAPVIEFLEEWGLESLEENAHSATPCTKVFVNGVWMGVHRDPANLVKTI
KKLRRKDDISPEVSVVRDIRERELRLYTDAGRVCRPLFIVENQQLALQKKHVRWLNQGEN
DDGEPWKWDQLVKNGIVELLDAEEEETVMISMTPEDLENSRLQSAGIDPHANEGDFDPSA
RLKAPTHGHTWTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYLTNFLV
RMDTMANILYYPQKPLATTRSMEYLRFRELPAGQNAIVAILCYSGYNQEDSVIMNQSSID
RGLFRSIYYRSYMDLEKKSGVQQLEEFEKPTRDTTLRMKHGTYDKIEDDGLIAPGTGVNG
DDIIIGKTAPIPPDSEELGQRTRSHTRRDVSTALKSTESGIVDQVLITTNSEGQKFVKVR
VRSTRIPQIGDKFASRHGQKGTIGITYRQEDMPFTAEGITPDIIINPHAIPSRMTIGHLV
ECLLSKVATLIGNEGDATPFTDLTVESVSTFLRQKGYQSRGLEVMYHGHTGRKLQAQVYL
GPTYYQRLKHMVDDKIHSRARGPVQILTRQPVEGRSRDGGLRFGEMERDCMISHGIAGFL
KERLFDASDAYRLHVCDLCGLTAIANLKKQTFECRACKNKTAISQLYIPYAAKLLFQELQ
SMNIAARLYTVSTGRIRD
NT seq 3657 nt   +upstreamnt  +downstreamnt
acgcaagatccctatgcgtacgatgacccaaactacggtgtggaggaagaggaggacgag
tacgaggagataacccaggaggattgctggacggtcatctcctccttctttgagcagaaa
ggtctcgtgcgccagcagctcgactcgttcgacgagttcgtccagaacacgatgcaggag
ctcgtcgacgagaactcagacctcatcctcgaccaggagaaccagcacaccggtcacgag
gcggactcgacgcggcggtacgagatcaagttcgggcagatatacctgtcgcggccaacg
attaccgaggcggacgggtcggtggtgccgctgttcccgcaggaggcgcgtctaaggaac
ctcacctattcgtcgactttatacgtggatatgaagaagcgggtgttgacaagtagggag
gacccagataatcctggggagacgatatgggagccggagcgtggtgaggtgccggaggat
actcagaaggtctggattggcagggttcccatcatgctgcggtcgacattctgtatcttg
cacgacctccaagaccaggatttgtacgacctgaatgaatgtccgtacgactctggagga
tactttattatcaacgggtcggaaaaggtactcatcgcccaggaacgtatggctacgaat
catgtctacgtctttgcgaaggcgcaaccctcccctatcagcttcttggctgaaatccgt
agtgctgtggagaagggcgggaagacgatcagtcagttccaggttaagatgtatcaccgg
aaccaagagcgatcccttgggagtgttatgaaggccaccattccttacattaaagtcgat
atccctatttgggttgtcttccgcgctctgggcgtcatctctgaccgcgatatactcgaa
catatctgctacgatatgcaagacttgcagatgctcgaaatgctgaagccttgcattgac
gacggcttcgtcattcaggatcgggagattgcattggacttcataggtaaccgtggtacg
acgactggtctctcccgggagcgacggttgcggtacgcgcaggaaatcctgcagaaggag
atgctgccgcatgtgtccatggctgaaggctctgagtcgaagaaggcgtacttctttggg
tacatgatccatcgactgctccttgctgccctggagcgtagggagctggatgaccgtgat
cactttgggaagaaacggcttgacctggccggccctctgctggctaacctgttccggatg
ctcttcaggaagttgacaaaggatgtctaccggtacttacagaagtgtgtggagacacac
aaagagttcaatctctcgcttgctgttaagcacaacaccatcacaaatggtctcaaatac
tcattggcaaccggtaactggggcgaccaaaagaagtctatgtcctcgaaagctggtgtc
tcgcaagtgttgaatcgttacacatatgcatccacgctctctcatctccggcgatgcaat
acgccattgggaagagaagggaagatcgcgaagcctcgccaattgcataatacccactgg
ggcatggtgtgtccagcagaaacgccggaaggccaggcttgcggccttgtcaagaactta
tctctcatggcgtgtatatcggtcggttccctgtctgcgcctgtcattgagttcttggag
gagtggggtctggagtccttggaagaaaacgcgcactccgcgacgccttgcaccaaggtc
ttcgttaacggtgtctggatgggcgttcatcgcgatcccgctaacttggttaagaccatc
aagaaactgcgtcggaaggacgatattagtcccgaagtctcggttgtgcgcgatatccgt
gagcgcgagctgcggctatatactgatgcaggccgtgtctgccgaccgctcttcatcgtc
gagaaccagcagcttgctctgcagaagaagcatgtcaggtggctcaaccagggagagaat
gatgacggcgaaccatggaaatgggatcaactcgttaagaacggtattgtggagttgctg
gatgctgaagaagaggagactgtgatgattagtatgacgcccgaggaccttgagaactcg
agacttcagtcggctgggattgaccctcatgccaatgaaggggacttcgacccgtctgct
cgactgaaggccccgacacacggacacacatggacacattgtgagatccatcctagcatg
attctcggtgtttgtgctagtatcatcccgttccccgaccataaccagtcccctcgaaat
acctatcaatcagccatgggtaaacaagctatgggtatctatcttaccaacttcctggtt
cgcatggatactatggccaatatcctctactatcctcaaaagccgctggctacgactcga
tccatggaatacctgcggttcagggagttgcccgccggccagaatgccattgtggcaatc
ttgtgttatagtgggtacaaccaggaagactccgtcatcatgaaccaaagttcaatcgat
cgtggtcttttccggagtatctattaccgcagctacatggacctcgagaagaagagcgga
gttcagcagctggaggagttcgagaagcctacacgcgatacaacactgcgcatgaagcat
gggacatacgacaagatcgaggatgatggactgattgctccaggtactggtgtcaacgga
gacgacatcatcattgggaagactgcgccaattcctcctgatagcgaggagctagggcag
aggactcggtcgcatactcgacgcgatgtttccactgctttgaagagcacggagagcggt
atcgtggatcaggttctcatcactaccaactcggaaggccagaagttcgtcaaggtccgg
gttcggtccacccgtattccccagattggcgataagtttgcttctcgtcatggtcagaaa
ggtaccatcggtatcacgtatcgccaggaagacatgccattcaccgctgaaggtatcaca
ccggatatcattattaatccccacgctattccctctcgtatgactatcggacacttggta
gagtgtctcctttcgaaggtcgcgacccttattggcaatgaaggtgacgcgacacctttc
actgatctgacggttgagtccgtctcgacgttcctccggcaaaaggggtaccagtcaaga
ggcctggaagttatgtatcatggtcatactggtcgtaaactccaagcacaagtttacctt
gggccgacttactatcaacggctgaaacacatggttgacgacaagatccattcgcgtgcg
cgaggccctgtacagatcctcactcggcaacccgtggagggtcgtagtcgcgatggtggt
ctgcgattcggagagatggagcgtgactgtatgatttcgcatggaatagctggtttcttg
aaggagcggctcttcgatgctagtgacgcttaccgtttgcatgtctgtgatttatgcggt
ctaaccgcgattgccaacctgaaaaagcaaacgttcgagtgccgcgcgtgcaagaacaag
actgccatctcgcaactatacatcccatacgccgcaaaactgttgttccaggaattgcag
agcatgaacatcgctgcgcgcctgtacaccgtctcgactgggcggatacgggactaa

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