Gloeophyllum trabeum: GLOTRDRAFT_32227
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Entry
GLOTRDRAFT_32227 CDS
T03130
Name
(RefSeq) splicing factor, CC1-like protein
KO
K13091
RNA-binding protein 23/39
Organism
gtr
Gloeophyllum trabeum
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gtr03041
]
GLOTRDRAFT_32227
Spliceosome [BR:
gtr03041
]
Common components
Common spliceosomal components
General mRNP proteins
GLOTRDRAFT_32227
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_3
RRM_occluded
RRM_7
Motif
Other DBs
NCBI-GeneID:
19305434
NCBI-ProteinID:
XP_007860296
JGI:
Glotr1_1_32227
UniProt:
S7QM79
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MDASPEHRDHEDRSKRRRDESAGENTLPPPPPEAGLPPPPPPPLSDSPRRRSERRDRSYD
RDRRYPDRPPRPRDPRDEFDDPLRPRRDERRRPPPDDDRDRHSSRGRSHPPLPADAAAAA
AAAIKRASPSYEAPVEEPFNPDEPKEDDSEQRSVFVSQLAARLTARDLGYFFEDHLGEGS
VMDARIVTDRLSRRSKGIGYVELRTIELVDKAIALSGTVVMGLPIKVQFTESERNRTHAG
DGSLNLPPGVSASHGPMQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGY
AFVQYKRREDAKMALEQMEGFELAGRTLRVNTVHEKGSVKYTQQDSLDEAGGGNLNAASR
QALMQKLARIEPAPTREEPVSRPNIPQMMQSKSVLLRNMFNPADEIERDWDKDLADDVKG
ECERRYGKIDAIKVEKDSEGEIYVRFDSVESAKNAVEGLNGRFFGGRQISAHFISDAIMQ
AHI
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggatgcttctccggaacaccgtgaccatgaagatcgttcgaagaggagacgcgacgag
agcgcgggcgagaacactctgccgcctcctcctcccgaagctggactgccgccaccgcct
ccgccgcctctgagtgatagcccacgtcgtaggtctgaaaggcgagaccgctcttacgac
cgagatcgcagatatcctgataggccgccaaggcctcgcgaccctcgcgacgaatttgat
gacccgctgcgtcctcgtcgggacgaaaggagacgtccacccccagacgatgacagggac
cgccacagcagccgcggtagaagccaccctccactccctgccgatgctgctgccgctgct
gctgctgctatcaaacgtgcttctcccagttacgaggcacctgtcgaggagcctttcaac
ccagatgaacccaaagaagacgattcggagcagcggtctgttttcgtttctcagttggct
gcgcggcttactgcgcgagatctgggctatttcttcgaagatcatctcggcgaaggaagt
gtcatggatgcgaggattgtaacggacaggctgtcgagacgttccaagggtatcggttat
gtcgagttacgcacaattgaactcgtcgacaaagctattgctctttcgggcacggttgtc
atgggtcttcctatcaaagtgcagtttactgaatccgagagaaataggacccatgcaggg
gatgggagcctcaaccttccgcctggcgtcagcgcatctcacggacctatgcagctctat
gtcggttctctgcactttaatcttaccgaatcagacatcaagcaggtattcgagccgttt
ggagaacttgaatttgtggatcttcatagggatcctatgaccgggcgcagcaaaggatac
gccttcgttcaatacaagaggcgcgaggatgcgaaaatggctcttgagcagatggagggc
tttgagctcgctggccgtacacttcgcgtgaacactgttcacgaaaagggttccgttaaa
tatacccagcaggattctctcgatgaagccggaggcggtaatttgaatgcagcatcacgt
caagcgctaatgcagaaacttgctaggattgagcctgcacctacgcgagaggagcctgtt
tcgcgtcccaacatacctcagatgatgcagtccaaatctgtactactaaggaatatgttc
aaccctgcagatgagattgaacgtgattgggacaaggacttggctgacgacgtcaaaggg
gagtgcgagcgacgatatggcaagatagatgctatcaaagtcgagaaggactctgagggc
gagatctacgtgcgatttgactcagtcgagtctgccaaaaatgccgtggaaggcttaaac
ggacgattctttggaggccgccaaatctcggcccacttcatatccgacgccatcatgcaa
gcccatatctga
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