Gloeophyllum trabeum: GLOTRDRAFT_34427
Help
Entry
GLOTRDRAFT_34427 CDS
T03130
Name
(RefSeq) argonaute-like protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
gtr
Gloeophyllum trabeum
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtr03019
]
GLOTRDRAFT_34427
03036 Chromosome and associated proteins [BR:
gtr03036
]
GLOTRDRAFT_34427
Messenger RNA biogenesis [BR:
gtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
GLOTRDRAFT_34427
Chromosome and associated proteins [BR:
gtr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
GLOTRDRAFT_34427
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
GLOTRDRAFT_34427
microRNA pathway
RISC loading complex
GLOTRDRAFT_34427
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoN
ArgoL1
PAZ
ArgoMid
ArgoL2
Motif
Other DBs
NCBI-GeneID:
19305557
NCBI-ProteinID:
XP_007861761
JGI:
Glotr1_1_34427
UniProt:
S7QI59
LinkDB
All DBs
Position
Unknown
AA seq
899 aa
AA seq
DB search
MGPRPAGAGGRGRGGPSRGGPPTRGGAAAGASGGGSAVYTTSPHVTTVGVKRTAFGTSGR
RMEVYTNHFAVKIPEAVIHHYDVISPSEKTLPARLNMELITTLQLKVAANIFTPRAVYDG
RKNLFAARELPFGPNTPSREFEVEFNKKTYKIRLTKVAEINPEVLARFLEGKQSHDNAVL
TAITALNVVIRMEPTLNYPFNVRSFFTDKETKDIGSGIVLWRGYFQSIRPAIGRMLINVD
ISTGTMYKSGSLLKLCLEFVGRSDQPLALAPRRGFPDRERLRLQRFISGIRILTKTPGEG
QQSRTPRVLKKLSTAGASDLTFTMREGGTMTVAEYFQKTYNMRLQFPEVLCAEVGSGALI
PLELCVVPPGQIMRKQVPPEKTKDVLDFATKRPEDRLQSIRNGLSVLQYGQSEYVRQFGM
VVDEAAGALTINARVLDTPTLRYGKGSRQPTIVRVSEFFLIDKKFYSPASIDKWVVVVYE
RQQRFNANNVREMVEGFVAACRDVGMVVKDPNPIVRWENGQGNIGAQLREAGKECMTKTG
SPPSLIVAVLPEGGTDIYTAIKHFGDITMGVATQCLKSSRCFRAKPQYYANVSLKLNVKL
GGINTIPDPPSAPFLTDPNNPTIVMGADVIHPAPGSEGRPSFTSLVANVDSDTAKYIAAS
RVQTSRQEIIEDLGDMAHHMLDMYMKYRRGVEKKANPVPKRIIFYRDGVSEGQFKQVLDL
VDSRRVLEACQKLNIKPTITVVVVGKRHHVRFFPKNPSDGDRKSGNCPAGTVIDRDVAHP
TEFDFYLQSHGGLLGTSRPAHYNVLYDENNLTPDGLQSLSFALCHVYARSTRSVSIPAPV
YYADIVCTRAKNHYDPNERLDFSDSATNLEEGAADQSLDKFKRGFKPLHQKMTTLMYFS
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgggtccgaggcctgctggagcaggtggtagaggccgcggaggcccttccagaggcggt
ccgcccactcgtggtggtgcggcggcaggtgcctctggagggggatcggctgtctatacc
acgtcgccgcatgttacgacggtcggcgtgaagcgaacggcgtttggaacatccgggaga
cggatggaagtatatacaaaccattttgctgtcaagattcctgaggcagttattcaccac
tatgatgttatatcgccttcggaaaagaccttaccggccaggctgaatatggagctcatt
acaacgctccagttgaaagtagcagcgaatatttttactccgagggccgtctacgacggt
cgcaagaatttatttgctgcgcgagagctccctttcgggccgaacactcctagccgcgag
ttcgaagtggagtttaataaaaagacttacaagatacgactcaccaaggtggcggagatc
aatccagaggttctggctcgattcttggaaggaaagcagtcgcacgacaacgccgttctt
acagccataacggccttaaacgtcgttatcaggatggagccgactctaaattatcccttc
aatgtccgatcgttcttcacggacaaggaaacgaaagacattggatctggaatcgtccta
tggagaggttatttccagtccatacgcccggcaattgggcggatgttgatcaacgtcgac
atctccactggaacgatgtacaagagcggctcactcttgaagttatgtcttgagtttgtt
ggccgttctgatcagcctcttgccttagctcctcgtagaggcttcccagacagggagagg
ctccgtttgcaaagattcatctctgggatccgcattctcaccaagactcccggtgaaggt
cagcaaagtcgcacgccgagagtcttaaagaagctgtcgacagctggagcaagcgatctg
actttcaccatgcgcgagggtggtaccatgaccgtggcagaatactttcagaaaacatac
aatatgcgactccaatttccggaagtgctctgcgcggaggttggctctggtgctctaatc
cccctagaattgtgtgtcgtgcctccaggacaaatcatgagaaagcaagttccgccggag
aaaacgaaagatgtgcttgactttgctacaaagagaccggaagatcgtcttcagagcatc
aggaacggcttaagcgtccttcaatacgggcaatccgagtatgtccggcagttcgggatg
gtagtcgatgaggctgcgggcgccctcaccatcaacgcccgtgttctggacactccaact
ttgcggtatggcaaaggaagtcgccaaccgaccatcgtgcgcgtcagcgaatttttcctg
atagacaagaagttctacagcccggcgagtatcgacaagtgggtcgtagttgtgtatgaa
cggcagcaacgtttcaacgcgaacaacgtccgagagatggtcgagggtttcgtggctgcg
tgtcgagacgttggcatggttgtgaaggacccgaacccgatagttcgatgggaaaatggt
cagggcaatataggcgcgcaacttcgtgaggcaggaaaggagtgcatgactaagacgggc
tcgcctccgagtctgatcgtcgcagtactgcccgaaggtgggactgatatctatactgct
atcaagcatttcggggacattacgatgggagtggcgacgcaatgtttgaagagctctcgc
tgcttccgcgcgaagcctcaatactatgcaaatgtttctctcaagctcaacgtgaagctg
ggtggtatcaatactatccctgacccgccctccgctccattcctcacggatccgaataac
ccaaccatagtcatgggcgcagatgtcattcatcctgctcccggttcagagggtcgcccc
tccttcacatctctggtggcgaacgtcgactccgacactgcgaagtatatcgcagcgtcg
cgagtccaaacatcgcgtcaggagataatagaagatctgggtgatatggcgcatcatatg
ctcgacatgtacatgaaataccgtcgaggcgttgagaagaaggctaatcccgtgccaaag
agaattatcttctatcgagatggagtatcggaggggcagttcaagcaggttcttgactta
gttgactcacgtcgcgttctagaggcttgccagaagttgaatattaagccgaccatcacc
gttgttgtcgttggcaagaggcatcacgtccgcttcttccctaagaaccccagcgatgga
gacaggaagagtgggaactgtcccgccggcactgtcatcgaccgagacgtggcgcaccct
acggagttcgatttttatcttcagagccacgggggtctgctgggaacttctcggccagcc
cactacaatgtgctttatgacgagaataacttaactccggatggcctccagtctttgtcc
ttcgcactttgccatgtctacgcccgttccaccagatcggtgtcgattccagccccagta
tactatgcggacatcgtgtgcacccgggccaaaaatcattatgatcccaacgaacggctc
gacttctccgactcggcgaccaatcttgaggaaggcgcggcagatcaaagtctagacaag
ttcaagagagggttcaagcctcttcatcagaagatgacgactctcatgtacttttcttga
DBGET
integrated database retrieval system
