Gloeophyllum trabeum: GLOTRDRAFT_34951
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Entry
GLOTRDRAFT_34951 CDS
T03130
Name
(RefSeq) DNA replication factor C, large subunit
KO
K10754
replication factor C subunit 1
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03030
DNA replication
gtr03410
Base excision repair
gtr03420
Nucleotide excision repair
gtr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GLOTRDRAFT_34951
03410 Base excision repair
GLOTRDRAFT_34951
03420 Nucleotide excision repair
GLOTRDRAFT_34951
03430 Mismatch repair
GLOTRDRAFT_34951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gtr03032
]
GLOTRDRAFT_34951
03400 DNA repair and recombination proteins [BR:
gtr03400
]
GLOTRDRAFT_34951
DNA replication proteins [BR:
gtr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
GLOTRDRAFT_34951
DNA repair and recombination proteins [BR:
gtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
GLOTRDRAFT_34951
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
nSTAND3
AAA_22
AAA_14
NTPase_1
AAA_5
AAA_18
AAA_assoc_2
AAA_16
RuvB_N
AAA_30
AAA_24
RNA_helicase
AAA_33
AAA_7
Motif
Other DBs
NCBI-GeneID:
19305591
NCBI-ProteinID:
XP_007861795
JGI:
Glotr1_1_34951
UniProt:
S7S227
LinkDB
All DBs
Position
Unknown
AA seq
721 aa
AA seq
DB search
MAGPRAPGSKAVPEPQCAEPLAGLAFVFSGELSSFSRDEAVDLAKRFGGRVTGQPSSRTS
YVVLGDDAGPSKLAAIKKHNLRTLSEDEFLQLIATRNPGGGELDEKTRKKKEKEQDAIRE
GAREMEKREKAAMKEAKAGSVGSAKAVDTSTQLWTVRYAPQTLKEICGNKGQVEKLLLWL
QDWPKSLKSGFSKPGKNGMNIFRAVMITGPPGIGKTTSAHLCAKLAGFTPIELNASDARS
KKLVELVIDSHKPNQKTNAAGVEISDKSCLIMDEVDGMSAGDRGGVGALNQLIKKTKIPI
ICIANDRQAQKLKPLIATTYSLPFKKPDAAAVRSRILTVAYKEKMKIPANVVDQLVAGAQ
SDIRQVLNMLSTWKLSSSTMDFDESKELVKMNEKYAIMTPFNVTYKILGPYTFSPTSRET
LGDKMELYFHDFSFVPLFIQAPENYLKTQPVKVRNLAGPEKDLKELELMDKAATSISDGD
LVDGLIHGSVPRVVDLRSLICKVCRSEQHWSLMPLHAVLSTVRPASFIYGNCQQWLGQNS
KQNKLSRQLNDVQVRMRLKVSGDKSEVRQSYIPALFPVIVKPLMDVGASAVDEVIDRMDD
YYLSKEDWDTIVELGVDQNKDELVLKKIPAATKTALTRKYNSREHPIPFHKAQDLGKAPK
KIAASEVPDLEEAFDVDEDVPEEVVEDDQGEDEDVSKDKLIKMPKANKGKPAAAKAKGKK
G
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcccgagggcgccggggtcgaaagcggtgccggagccgcagtgcgcggagccg
cttgccgggctcgcgttcgtcttctcgggcgagctgagcagcttctcgcgtgacgaggcc
gtcgacctcgcgaagcgtttcggcggtcgcgtgacaggccagccctcgtccagaacctcg
tacgtagtcctgggcgatgacgcgggcccgagcaagctcgccgcgatcaagaagcacaac
ctgcgcacgctctcggaggacgagttcctgcagctgatcgccacgcgcaatcccggcggg
ggcgagctggacgagaagacgcgcaagaagaaggagaaggagcaggacgcaatccgcgag
ggcgcgcgcgagatggagaagcgcgagaaggcggcgatgaaggaggcgaaggcgggcagt
gttgggagcgcgaaggcggtagatacgtctacgcagctgtggacggtgcggtacgccccg
cagacgctgaaggagatatgcgggaacaagggccaagtcgagaagctcctcctttggctg
caggactggccgaagagcctgaagagcggattcagcaagcctggcaagaacggcatgaac
atcttccgggcggtgatgattacgggaccgcccgggattgggaagacgacgagcgcacat
ctatgcgcaaagctggcgggattcacgcccattgagctgaacgccagcgacgcacggagt
aagaagctcgtagagctggttattgactctcacaaacccaatcagaaaactaatgctgcc
ggcgtcgagatttctgacaagtcttgcctcatcatggatgaagtcgatggtatgtccgct
ggcgaccgtggcggagtgggtgcattgaatcagctcattaagaagacgaagatcccgatc
atctgtatcgcgaatgatagacaagcgcagaagctcaagccgctcattgctacgacctat
agcttaccgttcaaaaaacccgatgctgcggctgtccgatcgcggattctgactgtggct
tacaaggagaagatgaaaatccctgccaacgtcgtcgaccaactagtcgccggagcgcag
tccgatattcggcaggtactcaatatgttgtccacgtggaagctatccagtagtacgatg
gactttgacgagagcaaagaacttgtcaagatgaacgagaaatacgccatcatgactcct
ttcaacgtgacgtacaagatccttggaccgtatacattctctcctacttctcgggagaca
ctgggggataagatggaattgtatttccatgatttctcttttgttccactattcatccag
gcacctgagaattatctgaagacgcagcccgtgaaagtcaggaacctagctggcccagaa
aaggacctcaaagaactcgagctcatggataaggcagccacttcaatctcggatggcgac
ctagtcgatggattgatccatgggtcagtgccaagggtggtcgacttgcgctctctaatt
tgcaaagtttgtagatctgagcaacattggtcgctgatgccactgcatgccgtcctgtct
acagtgcgcccggcttcattcatatatgggaattgccaacaatggctgggccagaactcg
aaacagaacaaactgtcccgacagctgaatgacgtgcaggtgaggatgcgcctgaaggtc
tctggtgacaagtccgaggtccggcagtcatatatccccgcgctgttccctgtcatagtg
aagccattgatggatgtcggagcaagtgccgtggacgaggttatcgacagaatggacgac
tactacctgtcgaaggaggactgggatactattgtcgaattgggagtggatcaaaacaaa
gacgagctcgtgctcaaaaagatccctgctgcaacaaagactgcgctcactaggaagtat
aattctagagagcatcccataccgttccacaaggcgcaagacttgggtaaggcgccgaag
aaaatcgccgcctctgaagtgccagatctggaagaagcatttgacgtggacgaggacgtc
cctgaagaggtcgttgaggacgatcaaggcgaggatgaggacgtcagcaaggacaaactt
ataaagatgccgaaggcgaataaagggaaacccgctgcggccaaagccaaggggaagaaa
ggctga
DBGET
integrated database retrieval system
