Gloeophyllum trabeum: GLOTRDRAFT_39327
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Entry
GLOTRDRAFT_39327 CDS
T03130
Name
(RefSeq) Rcd1-like protein
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GLOTRDRAFT_39327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtr03019
]
GLOTRDRAFT_39327
Messenger RNA biogenesis [BR:
gtr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
GLOTRDRAFT_39327
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
TPR_IPO11
Motif
Other DBs
NCBI-GeneID:
19305902
NCBI-ProteinID:
XP_007864762
JGI:
Glotr1_1_39327
UniProt:
S7QA15
LinkDB
All DBs
Position
Unknown
AA seq
277 aa
AA seq
DB search
MGAGLSAHDDKVYALVIELMDPATRESALLELSKKREQYDDLALILWHSFGIMPALLQEI
VSVYPLLSPPNLTAHVSNRVCNALALLQCVASHSETRQLFLNAHIPLFLYPFLNTTSKTR
PFEYLRLTSLGVIGALVKQNDNTSVIHFLLSTEIIPLCLRIMETGSELSKTVAIFIVQKI
LLDETGLTYICHTYERFYAVGTVLSNMVNQLVETQAVRLLKHVVRCYLRLSDNLRAREAL
RACLPEPLRDNTFAALLKGDMVTKRCLTTLLNNLNEQ
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgggcgccggcctcagcgcccacgacgacaaggtttatgctctggtgatagagctcatg
gatccagccactcgggagagtgcgctgttggagctgagcaagaagagagagcagtacgac
gacctcgcgctgatcctttggcattcctttgggattatgcctgcgctattgcaggagatt
gtctctgtatacccgctgctctcacctcccaacctcaccgcccatgtttcgaatcgtgtt
tgcaatgctctggctctcctacagtgtgtggcttctcactcggagacaaggcaattgttc
cttaatgcccatataccgttattcttataccccttcctgaacactacatccaaaacccga
ccgttcgagtatcttcggctgacgtcgcttggcgtcattggcgctctcgttaaacaaaat
gacaatacctccgtcatccacttcctcctctccaccgagatcattcccctctgcctgcgc
atcatggagacaggctcggaactctccaagaccgttgccatcttcatcgtccagaagatc
ctccttgacgagacgggtctcacgtacatctgtcacacgtacgagcggttttacgcggtg
gggaccgtcctcagcaatatggtcaaccagctggtggagacgcaggctgtgcggctgctc
aagcatgtggtccgctgttacctgcggttgagcgataacttgagggcgagagaagctttg
cgcgcgtgcttacctgagccgctccgcgacaatacctttgcggctcttctaaagggtgac
atggtgaccaagagatgtctcacaaccctactcaacaatctcaacgagcagtaa
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