Gloeophyllum trabeum: GLOTRDRAFT_39841
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Entry
GLOTRDRAFT_39841 CDS
T03130
Name
(RefSeq) WD40 repeat-like protein
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr04145
Phagosome
gtr04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
GLOTRDRAFT_39841
09142 Cell motility
04814 Motor proteins
GLOTRDRAFT_39841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gtr03036
]
GLOTRDRAFT_39841
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gtr04812
]
GLOTRDRAFT_39841
Chromosome and associated proteins [BR:
gtr03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
GLOTRDRAFT_39841
Cytoskeleton proteins [BR:
gtr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
GLOTRDRAFT_39841
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR55
Beta-prop_EIPR1
WD40_RFWD3
PEP5_VPS11_N
Beta-prop_RIG_1st
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
19305942
NCBI-ProteinID:
XP_007864802
JGI:
Glotr1_1_39841
UniProt:
S7RTD2
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MSDKRRAEIEAKRAKLQELRKARAERQKERNAASEASPSTGPPRDVDDLINSLLGGSRPG
RGVHSAGDVTPSSSVPGTPTLGGGSTLAGPSGYSGRRSRQSDFGSEPVSIGTTLAHSATD
DVMDRTMTSRLIPDLIDVEQELFELPQKVGVPHERVIYNKEVQTMSVETEPSPDIEEQIR
ERILREKERELEVERAREKELEEESVKLDKEIEQEIRELTEEEKISVFTSPEFLDFVEQS
SKIVERALNDNYDYIRDYTVGAESGGDDSEGKRVKRVCAFWDERYCKNRSITDVDWSPKY
PELSCASYNKNPAALNEPDGIVAVWNLHLLERPEFVFHSQSDVLSVTFSPFHSNLVFGGT
YSGQILLWDTRSKHLPVLKTPLSAAGHTHPVYAMQMVGTQNAHNLITSSTDGLVCSWLVD
MLAQPQETLELVHAGHSKTGEVAITTLDFPDNETTTFWVGTEEGNVYQANRYDRAGAKAG
LNQYDIYRGHSGPIMGIHFHPLVGPVDFSDLFLTCSVDWTVKLWRAKSLAKPSTTAHSVP
PVYSFDEADDYVYDVKWHPSHPALFGTADGSGKFLLWNLNQDTEVPVVSTTVGSGRAINK
IQWDGKDGRRAALGGSDGKLYVYDIGDMAIPRESEWTDMQRTVSGIVGGGNANGVIDGDS
RVLAGR
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaagcggagggccgagattgaggccaagagagccaaactccaagaattgcgc
aaggccagggccgaaaggcaaaaggaaagaaatgcagcttctgaggcatcaccgagcaca
ggcccgcccagggatgtggacgacctcataaactcgttactcggtggcagcaggcccggg
aggggcgtgcacagtgcaggggacgtgacgccctcatcctctgtgcccggaacacctacg
ctcggagggggctctacccttgcaggcccctctggttactctggacggcggagtcgacag
agtgactttggttctgagccggtgagcatcggcacaacgctcgctcattctgccacagat
gatgtgatggatcggaccatgacgtcgcggctcattcccgaccttattgacgtcgagcaa
gaactcttcgagctcccgcagaaggtgggcgtgcctcatgaacgagtgatctataataag
gaagtgcagacgatgtcggtggagacggaacccagtcctgacatcgaggagcaaatccga
gagcggatactacgggagaaagagcgagaattggaagttgaacgagcgagggagaaggag
ctcgaggaggagagcgtgaaacttgacaaggagatcgagcaggaaatccgagagctgacg
gaagaggagaaaataagcgtattcacctctcccgagttcttggacttcgtcgagcagtcg
tcaaagatcgtcgagcgggctctcaacgacaactacgactacatacgagattatacagtc
ggcgcggaatccggcggagatgactccgaagggaaacgcgtgaagagggtttgtgcattc
tgggatgaacggtactgcaagaaccgttcgattacggacgttgattggtcaccaaagtac
ccggaactcagttgtgcctcttacaacaagaatcctgcagcattgaatgaaccagacggt
atagtagccgtttggaacctgcacttacttgagcggcccgagttcgtcttccactcgcag
tctgacgtactctctgtgaccttctcccccttccactcgaacctcgtatttggtggtacc
tactcaggccagatcctgttatgggatacacggtcgaaacacctgcccgttctgaagaca
cctttgtcggcagcgggtcatacgcatcctgtttatgcaatgcagatggtcggtactcag
aatgctcataacctgattaccagtagcacagatggattggtctgcagttggctcgtcgac
atgctggcccagcctcaggaaacactggaactagtgcatgcgggccacagcaagacgggc
gaagtggcgatcaccactctggatttccctgacaatgagaccacgacattctgggttggg
actgaagaaggaaatgtctaccaggcgaatcgatatgaccgtgcaggggccaaggctggt
ctgaaccaatatgacatctaccggggacactccggacctatcatgggcattcatttccat
cctctcgtggggcctgtcgatttctcagacctcttcctcacctgttcggttgactggact
gtcaagttgtggcgagccaagtctctggccaagccctccacgacggctcattcagtgccg
cccgtgtactccttcgatgaggcagacgactacgtctatgacgtgaaatggcacccgtcc
cacccagcgctgttcgggactgctgacgggtctggcaagttcttactctggaacctgaac
caggataccgaggttcccgtggtctccactacagtaggatccgggcgggccataaataag
atacagtgggacggcaaggatggcagacgcgccgcgctgggagggagtgatggcaaactg
tacgtgtatgatatcggcgacatggctatccctcgggagtcggagtggacggacatgcag
aggacggtgtctgggatagtcggcggcgggaatgcaaacggggtgattgacggcgactcg
cgggtgctcgctggccgatga
DBGET
integrated database retrieval system