KEGG   Gloeophyllum trabeum: GLOTRDRAFT_39841
Entry
GLOTRDRAFT_39841  CDS       T03130                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K10415  dynein cytoplasmic 1 intermediate chain
Organism
gtr  Gloeophyllum trabeum
Pathway
gtr04145  Phagosome
gtr04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:gtr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    GLOTRDRAFT_39841
  09142 Cell motility
   04814 Motor proteins
    GLOTRDRAFT_39841
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gtr03036]
    GLOTRDRAFT_39841
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:gtr04812]
    GLOTRDRAFT_39841
Chromosome and associated proteins [BR:gtr03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   SAC (spindle assembly checkpoint) factors
    Motor proteins
     Dynein complex
      GLOTRDRAFT_39841
Cytoskeleton proteins [BR:gtr04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Dyneins
     GLOTRDRAFT_39841
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_RIG_2nd Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_IFT140_1st Beta-prop_TEP1_2nd Beta-prop_EML WDR55 Beta-prop_EIPR1 WD40_RFWD3 PEP5_VPS11_N Beta-prop_RIG_1st Beta-prop_SPT8
Other DBs
NCBI-GeneID: 19305942
NCBI-ProteinID: XP_007864802
JGI: Glotr1_1_39841
UniProt: S7RTD2
LinkDB
Position
Unknown
AA seq 666 aa
MSDKRRAEIEAKRAKLQELRKARAERQKERNAASEASPSTGPPRDVDDLINSLLGGSRPG
RGVHSAGDVTPSSSVPGTPTLGGGSTLAGPSGYSGRRSRQSDFGSEPVSIGTTLAHSATD
DVMDRTMTSRLIPDLIDVEQELFELPQKVGVPHERVIYNKEVQTMSVETEPSPDIEEQIR
ERILREKERELEVERAREKELEEESVKLDKEIEQEIRELTEEEKISVFTSPEFLDFVEQS
SKIVERALNDNYDYIRDYTVGAESGGDDSEGKRVKRVCAFWDERYCKNRSITDVDWSPKY
PELSCASYNKNPAALNEPDGIVAVWNLHLLERPEFVFHSQSDVLSVTFSPFHSNLVFGGT
YSGQILLWDTRSKHLPVLKTPLSAAGHTHPVYAMQMVGTQNAHNLITSSTDGLVCSWLVD
MLAQPQETLELVHAGHSKTGEVAITTLDFPDNETTTFWVGTEEGNVYQANRYDRAGAKAG
LNQYDIYRGHSGPIMGIHFHPLVGPVDFSDLFLTCSVDWTVKLWRAKSLAKPSTTAHSVP
PVYSFDEADDYVYDVKWHPSHPALFGTADGSGKFLLWNLNQDTEVPVVSTTVGSGRAINK
IQWDGKDGRRAALGGSDGKLYVYDIGDMAIPRESEWTDMQRTVSGIVGGGNANGVIDGDS
RVLAGR
NT seq 2001 nt   +upstreamnt  +downstreamnt
atgtcagacaagcggagggccgagattgaggccaagagagccaaactccaagaattgcgc
aaggccagggccgaaaggcaaaaggaaagaaatgcagcttctgaggcatcaccgagcaca
ggcccgcccagggatgtggacgacctcataaactcgttactcggtggcagcaggcccggg
aggggcgtgcacagtgcaggggacgtgacgccctcatcctctgtgcccggaacacctacg
ctcggagggggctctacccttgcaggcccctctggttactctggacggcggagtcgacag
agtgactttggttctgagccggtgagcatcggcacaacgctcgctcattctgccacagat
gatgtgatggatcggaccatgacgtcgcggctcattcccgaccttattgacgtcgagcaa
gaactcttcgagctcccgcagaaggtgggcgtgcctcatgaacgagtgatctataataag
gaagtgcagacgatgtcggtggagacggaacccagtcctgacatcgaggagcaaatccga
gagcggatactacgggagaaagagcgagaattggaagttgaacgagcgagggagaaggag
ctcgaggaggagagcgtgaaacttgacaaggagatcgagcaggaaatccgagagctgacg
gaagaggagaaaataagcgtattcacctctcccgagttcttggacttcgtcgagcagtcg
tcaaagatcgtcgagcgggctctcaacgacaactacgactacatacgagattatacagtc
ggcgcggaatccggcggagatgactccgaagggaaacgcgtgaagagggtttgtgcattc
tgggatgaacggtactgcaagaaccgttcgattacggacgttgattggtcaccaaagtac
ccggaactcagttgtgcctcttacaacaagaatcctgcagcattgaatgaaccagacggt
atagtagccgtttggaacctgcacttacttgagcggcccgagttcgtcttccactcgcag
tctgacgtactctctgtgaccttctcccccttccactcgaacctcgtatttggtggtacc
tactcaggccagatcctgttatgggatacacggtcgaaacacctgcccgttctgaagaca
cctttgtcggcagcgggtcatacgcatcctgtttatgcaatgcagatggtcggtactcag
aatgctcataacctgattaccagtagcacagatggattggtctgcagttggctcgtcgac
atgctggcccagcctcaggaaacactggaactagtgcatgcgggccacagcaagacgggc
gaagtggcgatcaccactctggatttccctgacaatgagaccacgacattctgggttggg
actgaagaaggaaatgtctaccaggcgaatcgatatgaccgtgcaggggccaaggctggt
ctgaaccaatatgacatctaccggggacactccggacctatcatgggcattcatttccat
cctctcgtggggcctgtcgatttctcagacctcttcctcacctgttcggttgactggact
gtcaagttgtggcgagccaagtctctggccaagccctccacgacggctcattcagtgccg
cccgtgtactccttcgatgaggcagacgactacgtctatgacgtgaaatggcacccgtcc
cacccagcgctgttcgggactgctgacgggtctggcaagttcttactctggaacctgaac
caggataccgaggttcccgtggtctccactacagtaggatccgggcgggccataaataag
atacagtgggacggcaaggatggcagacgcgccgcgctgggagggagtgatggcaaactg
tacgtgtatgatatcggcgacatggctatccctcgggagtcggagtggacggacatgcag
aggacggtgtctgggatagtcggcggcgggaatgcaaacggggtgattgacggcgactcg
cgggtgctcgctggccgatga

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