Gloeophyllum trabeum: GLOTRDRAFT_40647
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Entry
GLOTRDRAFT_40647 CDS
T03130
Name
(RefSeq) DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GLOTRDRAFT_40647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gtr03032
]
GLOTRDRAFT_40647
Enzymes [BR:
gtr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GLOTRDRAFT_40647
DNA replication proteins [BR:
gtr03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
GLOTRDRAFT_40647
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DNA_pol_B_2
zf-Tbcl_FmdE
Motif
Other DBs
NCBI-GeneID:
19305992
NCBI-ProteinID:
XP_007864852
JGI:
Glotr1_1_40647
UniProt:
S7QB32
LinkDB
All DBs
Position
Unknown
AA seq
1467 aa
AA seq
DB search
MADRARRERASKLDKLAAYKRAREGGGRSWKEEDVNIYDEVTDDQYKRIVRGRLAKDDFV
VDDGVEGYMDNGMDDWDEGEDGEEEYESETDRKKKSKFKTGKQAKDEDRKNRAKPKAPPP
VAAPSISAYRPAVSAEQESDFMSTLLGDMDAIEPVTISKPNKTAHRSSRKRKPSPSPAWG
GSSSPARYGDYMSGPPDTDFEVMSPVKKMRTSGPGVTQPNDRLGNMGLQETHKMRDDVDY
DFDASFDDIDMNAFMDIDVDEHEKENGKVTLKKTDVEVDLKPLKPTNSVPAKKLKQDETP
SWLSVYDSLAVTTDDSLGSLAPSTATSNSSPGVTASSILEADGSLRFFWLDYLEHEGRLY
FTGKVLCRSSPGAAASYVSCCVTVANLQRNLFILPRERRMEEEEDGKFTIETDVVPDLND
VYQDFDRVRKKAGIKSFKAKFVKRNYAFGEPDVPRGEARWLKVVYPFEEPQVPNNVASPN
FSRIFGTNTSAFELFVLKRKIMGPCWLNIKKPHIEHKGVSWCKVEVSVDDPKDLNPFLES
DGDAPKDIPPLTVMSLSLRTIVNYQENKREIVCATARTWSNTQIDDPTPPEKLPCTSHTF
VRPLDLFPPNFEATAKKNSKGSIATMKNERMLLNSLLINIHKADPDVLVGHDFLGVSLDV
LLHRMRELKVEHWSRISRFRRSKWPGIGKQGTNLRFLNGRLLCDLASDGAKSMITSTTWS
LTEMCKTHLKSDRQDIDPDDTASYFDGSVSTPDRLMTFVRHCELDAHYHMAIASKVQILP
LTKQLTNLAGNSWNKTLNGGRAERNEYILLHEFHRLKYICPDKFWGKRAVAAVKAEANDE
EGEGSSKAATKGKRDKYKGGLVFEPKRGLWDKFILVMDFNSLYPSIIQEYNIDFTTVDRP
EEEEDGEEKIPEPPSSEVGQGVLPRLIATLVQRRRQVKSLMKDRSLSPAKLLQYDIKQMA
LKLTANSMYGCLGFEHSRFYARPLAALTTFKGREILTNTRELAESLQLDVVYGDTDSVFV
NTNVTELSEALRISAEFKKAVNDRYKLLEIDLDGIFQRLLLLQKKKYAAIKVEDGSRTST
EIKGLDMKRREFCALSKNVSQYVLDQILSGEETEIVVERIHEYLSNIGNDVREGKIKLDE
FIIFKRLGKNPEDYPDAKNQPHVQVALRQKSKGGNARSGDVIPYIFCLGADGETAKTGQA
DRARHPDEVRRAGSECKIDYEFYLSQQVLPPIERLCEPIEGTDRARLAECLGLDPSRYRS
SGSGEGMERLFSSLDSQISDAERFRDCDPLIIRCRGCQGEMPFVNICDRDSSIMQPSGAH
CLSCQSSITAVSMQMQLEAQIREHISRYYEGWTICDDPTCRNRTRMMSVYGRRCLRQGCR
GTVAFEYSDSELYNQLRFYAFLFDTQKALANAKGKGNPDLNISDEITGVITKNVELFQTM
SDTVEKYMDNCARRWVDLGSLFSFMKL
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccgtgctcgacgcgagagagcaagcaagcttgacaaacttgctgcgtacaaa
agggcgagggaaggcggtggtcgttcatggaaggaagaggatgtcaacatctacgatgaa
gttactgacgatcagtacaaacgaattgtgcgcggtcgtttagcaaaggatgacttcgtt
gtcgacgatggcgttgagggatatatggataatggtatggatgactgggacgagggggag
gacggggaagaagagtatgagtcagagaccgataggaagaagaagagtaagttcaagaca
ggcaagcaagcgaaagatgaagacaggaagaatcgcgcgaaacctaaagcaccccctcct
gtggcagctccgagtattagtgcctaccgtcctgctgtctcagcagagcaggagtcagac
ttcatgtcaacgctgctcggcgacatggatgccatcgaacctgtcaccatcagcaaaccc
aacaagactgcacatcgctcttctcgaaagcggaaaccctccccctctcctgcttggggc
ggaagctcttctccagctcggtacggtgattacatgagcggtcctcctgacactgacttt
gaggtcatgagcccggtcaagaagatgaggacatctggtccaggagttactcaacctaac
gaccggcttgggaacatgggccttcaagagacccacaagatgagagacgacgtcgactac
gacttcgatgcctctttcgacgacatcgacatgaatgccttcatggatattgacgtcgat
gagcacgagaaggagaatggcaaggttaccttgaagaagaccgacgtcgaagtcgacctg
aagcctctgaagcccacaaatagcgttcctgcgaagaagctgaagcaggacgagacgcct
tcatggttatccgtgtacgactcgctcgccgtcacgacagatgattccttgggatcatta
gcaccaagcaccgccacgagcaactcttctccgggagtaactgcttcttctatcttggag
gctgatggctctctaaggttcttttggctcgactatcttgaacatgagggtcgactatac
ttcactgggaaggtcctttgtcgcagtagccctggcgccgctgcttcatacgtatcatgc
tgtgttactgtggccaacctccagcgcaatctgttcatcctccctagagagagacgcatg
gaagaggaagaggatggcaaatttaccatcgagacagatgtcgttccggacctcaatgat
gtctaccaagactttgatcgagtgcggaagaaagctggcatcaagtctttcaaggctaag
ttcgtcaagcgtaactatgcgttcggagagcctgacgtccctcgcggtgaagcgcgctgg
ctcaaggtcgtctatcctttcgaagagccccaagtgcctaataacgtcgcgagccctaat
ttctccagaatctttggaactaatacgagcgcattcgagctatttgtgttgaagcggaag
attatgggtccttgttggttaaatatcaagaagccgcatatcgaacacaagggtgtttca
tggtgtaaagtagaagtttccgttgacgaccccaaggacctcaacccgttcttagagtct
gatggtgacgcaccaaaggatatcccccctctgacagtcatgagtctgagtctgaggact
atcgttaattaccaagagaataaacgagaaatcgtctgcgccaccgctcggacgtggtct
aacactcaaatagacgacccaacacctcctgagaagcttccttgcacgtctcacactttt
gtccgcccactggatctattcccgcctaacttcgaagctaccgccaagaagaatagcaag
ggttccatagcgacgatgaagaacgagcgaatgttgctgaatagcctcctcattaacatc
cacaaggcggatcctgacgttcttgtcggccatgactttctcggcgtctcacttgatgta
ctcttgcaccgcatgagggaactgaaggtcgagcattggtcccgaatcagcagattccgc
cgatcgaagtggcctggaatcggtaagcaggggacgaaccttcgtttcctcaatggccgg
ttactgtgcgacctggctagcgatggtgccaagagcatgatcacgtccactacttggtca
ctcaccgagatgtgcaagacgcacttgaagagtgaccgtcaagacatcgatcctgacgat
accgccagctactttgatggctccgtcagcactcccgatagattgatgactttcgtaagg
cactgcgagctcgatgctcattaccatatggcgatcgcctccaaggttcagatattgccg
ttgaccaagcagttgacgaaccttgctggtaactcctggaataagaccctgaacggtgga
agggccgagcgcaacgagtacattcttctgcatgagttccatcgactcaaatacatttgt
cctgacaagttctggggcaaacgcgccgtcgctgccgtcaaagctgaggctaacgacgaa
gaaggcgagggctcatccaaagccgcaaccaaaggaaagagggacaagtacaaaggtggt
cttgtgttcgagccaaaacgaggactctgggataaattcatcctggtcatggacttcaat
tccttgtacccaagtatcatccaagagtacaacattgacttcaccactgtcgacaggccg
gaagaagaagaggatggcgaagagaaaatcccagagccgccatcctctgaagttggccag
ggtgtgttgccgagactaatcgcaactctcgtccaacgtcgacgccaagtgaaatccctt
atgaaagaccgctccttgtcgcctgcgaaactccttcagtacgacatcaagcaaatggct
ctcaagcttaccgccaacagtatgtacggctgtctcggtttcgagcactcgaggttctac
gcgcggcctctcgctgctctcacgacatttaagggtcgtgagatcttgaccaatactcga
gagcttgccgagagcctccagcttgacgtcgtgtacggcgataccgattcagtgttcgtc
aacacaaacgttacggaactgtcggaggctctccggatctcggctgaattcaagaaagcg
gtcaatgatcggtacaagctgctggaaattgacttggatggcatattccagcgtctactc
cttctccaaaagaagaaatatgccgctatcaaagtggaagacggttcaaggacgtccaca
gaaatcaagggtcttgacatgaagcgtcgagagttttgtgctttgtctaaaaacgtctct
cagtatgtgctggatcaaatactctctggcgaggaaaccgagatcgttgtcgagcgaatt
cacgaataccttagcaacattgggaacgatgtccgggagggtaagatcaagttggacgag
ttcataatcttcaagcgactgggcaagaacccagaggactaccctgacgccaagaatcag
ccgcacgtccaggtagccctgagacagaagtcgaagggtggtaacgctcgttcgggcgac
gtcattccctatattttctgtctaggcgcggacggagaaactgccaagacagggcaagct
gacagagcccggcatccggacgaagtgcgcagggctggaagcgaatgcaaaattgactat
gagttctatctgtcgcaacaagtactcccacctatcgagcgtctatgcgagcccatcgaa
ggcacggatcgtgcgcgccttgctgaatgccttggcctcgaccccagcaggtaccgcagc
agcgggtcgggagaggggatggaaaggctcttctcttccctggactcccaaatatcggac
gcggagcggttcagggattgcgatccattgattatccggtgtcgcggctgccagggcgag
atgccctttgtgaacatctgcgatcgagactcgtccataatgcaaccatccggcgcgcac
tgcttgtcttgtcaatccagtatcactgccgtcagcatgcagatgcagctggaggcgcag
atccgcgagcatattagccggtattacgaagggtggactatttgcgacgatcctacctgc
cgaaatcggactcgtatgatgagtgtgtacggtcggcggtgtctgcgacaggggtgtcgt
ggcacagtcgcttttgagtactctgattcagagctatacaatcagctgagattttacgcg
ttcttattcgatacgcagaaggcattggcgaatgccaaagggaagggtaaccctgacttg
aatatttcagatgagatcacgggcgtgatcacgaagaatgtcgagctgttccagacgatg
tcggataccgttgagaagtatatggataattgtgcgcgacgctgggttgatctagggtcc
ctgttctcattcatgaagttgtaa
DBGET
integrated database retrieval system
