Gloeophyllum trabeum: GLOTRDRAFT_41174
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Entry
GLOTRDRAFT_41174 CDS
T03130
Name
(RefSeq) DNA polymerase beta, N-terminal domain-like protein
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GLOTRDRAFT_41174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gtr03400
]
GLOTRDRAFT_41174
Enzymes [BR:
gtr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GLOTRDRAFT_41174
DNA repair and recombination proteins [BR:
gtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
GLOTRDRAFT_41174
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
GLOTRDRAFT_41174
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HHH_8
DNA_pol_lambd_f
HHH_5
HHH
RecR_HhH
Vps54_N
Motif
Other DBs
NCBI-GeneID:
19306033
NCBI-ProteinID:
XP_007865536
JGI:
Glotr1_1_41174
UniProt:
S7Q7M2
LinkDB
All DBs
Position
Unknown
AA seq
168 aa
AA seq
DB search
CVNQDIVDKLQQLKELHEAKRGTEERWRVYAYGRAIGALRKYPKRITSYAEARKISGVGE
KTAQKIMEILDTGELKRIETENTEDVKVTALFRGIYGVGSQTAFQWYAAGCKTLDDVRAR
KGGIKVSSVQELGLKYYDGKSRTIRTPPSLIALRGPMISRHQRSYAPR
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
tgcgtcaaccaagatatcgtcgataagttacagcaactcaaagagctgcacgaagctaaa
cgaggaactgaagagcgatggcgtgtgtacgcctatggcagagccataggcgctctccgt
aagtatcccaagcgcatcacatcgtacgcggaagcgaggaagatctcaggcgtgggtgag
aagacggcccagaagatcatggaaatccttgatacgggcgagttgaagcggatagaaact
gagaacacagaagacgtcaaagtcacagcccttttccggggcatttatggcgtcgggtcg
caaaccgcattccagtggtatgctgcaggatgcaaaaccctcgatgatgtcagggctcga
aagggcggtatcaaagtctcctccgttcaagagctcggtctcaaatattatgatggcaag
tcacgcacaattcgtactcctccgagtctcattgcattgcgcggtcccatgatatccaga
catcaacgatcgtatgccccgcgctga
DBGET
integrated database retrieval system
