Gloeophyllum trabeum: GLOTRDRAFT_44121
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Entry
GLOTRDRAFT_44121 CDS
T03130
Name
(RefSeq) hypothetical protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr04138
Autophagy - yeast
gtr04142
Lysosome biogenesis
gtr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
GLOTRDRAFT_44121
04138 Autophagy - yeast
GLOTRDRAFT_44121
04148 Efferocytosis
GLOTRDRAFT_44121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gtr04131
]
GLOTRDRAFT_44121
Membrane trafficking [BR:
gtr04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
GLOTRDRAFT_44121
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
TPR_Vps41
VPS18_solenoid_2nd
TPR_19
WD40_like
Motif
Other DBs
NCBI-GeneID:
19306251
NCBI-ProteinID:
XP_007867217
JGI:
Glotr1_1_44121
UniProt:
S7Q3P1
LinkDB
All DBs
Position
Unknown
AA seq
1022 aa
AA seq
DB search
MAPFLPPKIALHGLKERVESLTVQGDRLYLGTATGSVSVYSLDENPVMMPVIGHEEEIAT
LVEVKKNLVRRAVEQLGFVKDINSLVLLSESTITLFPLPDFVPPTLLPKAKAAFSFAVNS
SVQQGPDPVNQSTTGDFERPKSVPTLVTYLAAGCRRKLVIYSWKDGEAQEPKEVPLPHSP
RVMAFMGHQAICLAYSATEFALYDFATNSVSDLVVPPTVTTAAGGVGALTGLGSYMTLGL
GAKAKPCLAKISDTQVLLAKDNVGIFFGPDGKVSRSGTVDWPGPPDEITYVKPYVLSVLP
PGAIPTSTSDASQSPLAQSSAIQIRSGISLSTVQTIAHPFTSGPAPHSTIRLLTHSSSAK
ATSYFVTTPIDRNAAASEGSSLWLLRMRTWTEQVDELVAAGSYAEALALLDVIDPSALPD
KEETRARIRALHAVSQFRAGNYEDAINTFISLDINPAKVVALYPESVAGRLSVPPDQWIP
LFGGPETASPDAGKDKDTDSDKGSATAKDTPERTATPVGSIREKLKTSLDAFMPSGSKDP
ETASITSVRRRQKPDNFHRSVETLLRYLPDRRPKIAAALAAVHITPSQSHRLSPLSETST
EELFALPDAPLSALTPDQLLRYAQVVDTALFKSYLIVRPGLLGPLCRTENWCEVSEVEEV
LLAREKYSELIYLYNGKKMHQKALDLLKQLSEKEEDMEDKLMPSITYLQRLGPEYLDQIF
KSSRWLLEKDPDMAFQIFTSEEVELPRKPVADFLESIDPRICARYLEYSLQEKEERDPSF
HDRLAEVYLHITLHAQEVHDEAMRKEYYDKLLHFLDSNGYYHVEHLFGMLPMEELFEARA
ILLGKLGRHQHALEIYVYRLHDYSAAESYCKRIYQPDSPTSNVFLTLLRIYLRPTTQTCD
MLKPALDLITRHSPRLDVVETLQLLPPLVTAKDVRAFLVEALRVPIFDSHVIREISKARN
EQIARKLMVLQSNRVKVSDSRICPQCHKRLGNSVIAVHAPRGEVTHYQCREAFSRRLNEV
RR
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggctcctttcttgccgccgaagattgctttgcacgggctgaaggaacgggtagagtct
ttgactgtgcaaggggacagattatatctggggacagctactggcagcgtcagcgtatac
agcctagatgagaatccggtcatgatgcctgtgatagggcatgaggaggagatagcaaca
ttggtggaggttaagaagaacttggtgaggcgggctgtagagcagctgggattcgtcaag
gatatcaattctctggttcttctttcagaatcaactatcaccctattccctctccctgac
ttcgtacccccgaccctgctgcccaaggcaaaggcagcgttctcctttgctgtaaattcg
tcggtacaacagggccctgatcccgtcaatcagtcgacgacgggcgatttcgagaggccg
aagtcggtgccgacgttggtcacctatcttgcagcagggtgtcggaggaagctggtgata
tactcttggaaggatggagaggcacaggagccaaaggaagttcccctccctcattccccc
cgagttatggctttcatgggacaccaggccatatgccttgcatattccgccactgagttt
gccctttatgactttgctaccaactccgttagtgacctggtagtaccgccaactgtgacg
acggctgccggtggcgtcggtgcgttaaccggtcttggcagctatatgaccttggggctc
ggagcgaaagccaaaccgtgtcttgcgaagatcagcgacacacaagtcttgcttgcaaag
gataatgtcggtattttcttcgggcctgacggcaaggtatccagaagtgggactgttgac
tggcctggtcccccggatgaaatcacctacgtaaagccctacgtcctgtccgtgttaccc
cccggcgccatcccaacctctacctccgacgcgtcccagtcgcctcttgcgcagtcatcc
gctatccaaatccgttccggaatctccctttccactgtccaaactatcgcacaccccttc
acctccggccctgcacctcacagcaccatccgccttctgacgcactcctccagcgccaaa
gcgacgtcctactttgttaccacacccatagaccggaacgcagctgcatccgagggtagc
tccctatggcttctgcggatgcggacgtggacggagcaagtcgacgagctggtcgccgct
gggtcgtacgccgaggccctggccttgctggacgtcatcgacccttccgcgctcccagac
aaggaggagacgcgcgcccgcatacgtgcgctgcacgcggtgtcacagttccgcgcgggc
aactacgaggacgcgatcaacacgttcatctcgctcgacatcaaccccgccaaggtggtc
gctttgtaccccgagagcgtcgcgggccggctgtccgttccccccgatcagtggataccg
ctctttggtggcccagagacggcctcccctgatgccgggaaggacaaggataccgacagc
gataaggggagcgccaccgcgaaagacacgccggagcggacggcgacgcctgtggggagt
attagggagaagctgaagacgagcctggacgcgttcatgccgtctggctcgaaagatcct
gagaccgcttctatcaccagcgtcaggcgaaggcagaagcccgataatttccatcgctcc
gtggagactctcctcaggtacctgcccgaccgacgacctaaaatcgccgctgcactcgct
gccgtacatataacgccgtcgcagtcccaccggctgtccccgctatcggagacgtcgacc
gaggaactcttcgcgctccctgacgcccctctgtcggcgctgacaccagatcagctgctg
cggtatgcccaagtggttgatacggcactgttcaagtcgtacctcatcgtgcggccgggg
ctgcttggtccgctgtgccggacggaaaactggtgcgaggtgtccgaagtcgaggaggtg
ttgcttgcgcgggagaaatactccgagctgatatacctctacaatgggaagaaaatgcac
cagaaggcgctggatctgttgaagcagctgagtgagaaggaggaggatatggaggacaag
ctgatgccgtcgattacgtatctgcagcgtctgggcccggagtatctggaccagatcttc
aagtcatcgcggtggttgctcgagaaagatccagatatggcgtttcagatatttacttcc
gaggaagtggagttgccgcggaagcccgttgcggacttcttggagagtattgacccgagg
atttgcgcgaggtatctagagtactcgttgcaggagaaggaggagcgcgaccccagcttc
catgatcgattggcggaggtatatctgcacatcacgctccatgcccaggaggtgcacgac
gaggcgatgcgcaaagagtattacgacaagttgttgcatttcctggattcaaatggctat
taccacgtagagcatctgtttgggatgctccccatggaggagctattcgaagctcgggct
attctcctgggtaagctggggcgacatcagcatgcgctggagatctacgtatatcggcta
cacgactactctgcagcagagtcgtactgcaagaggatataccaaccggactcgccgact
agtaatgtctttctgacactgctgcggatataccttcgcccgacaactcagacgtgtgat
atgctgaaaccagcgttggacctgatcaccaggcacagtccccgtttagatgtagtggag
acattacaattgcttcctccgttggtcacagcgaaggacgtccgggctttccttgtcgag
gcactgcgggtccccatttttgactcgcatgtcatacgggagataagcaaggcgcgcaac
gagcaaattgccaggaaactgatggtgctgcagagtaaccgagtgaaagtgtcggattcg
agaatatgtccgcagtgccataaacgcctaggaaacagcgtcattgctgtgcatgcaccg
aggggcgaagtgactcattaccagtgccgcgaggcattctcgcgcagactgaacgaggtt
agacggtga
DBGET
integrated database retrieval system
