Gloeophyllum trabeum: GLOTRDRAFT_46626
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Entry
GLOTRDRAFT_46626 CDS
T03130
Name
(RefSeq) UvrD-helicase-domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03420
Nucleotide excision repair
gtr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GLOTRDRAFT_46626
03430 Mismatch repair
GLOTRDRAFT_46626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gtr03400
]
GLOTRDRAFT_46626
Enzymes [BR:
gtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GLOTRDRAFT_46626
DNA repair and recombination proteins [BR:
gtr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GLOTRDRAFT_46626
MMR (mismatch excision repair)
Other MMR factors
GLOTRDRAFT_46626
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
ADDB_N
AAA_11
Motif
Other DBs
NCBI-GeneID:
19306449
NCBI-ProteinID:
XP_007868688
JGI:
Glotr1_1_46626
UniProt:
S7PYW7
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
VAVRHPHDIPLQILAGPGSGKTKKVLTSRIAYLILHEHVQPSSICAVTFTNKAAREMKER
LTKVIGKAKVDEVKMGTFHALCALFLRRYPTRVGIKSNFTVCDADESKKILKKLLGSYKD
YLEERNITLDVRSVTSIISKAKSRGESWRALAVRSTSTIELASQTGHDLNRIIAELYEAY
EKYLRENNSLDFDDLLVYGVELFSRNKEVIAWCTHVLVDEFQDTNTLQYELMRHIASVSR
CVTIVGDPDQSIYGWRSAEVANLAKMRIDFPSTVQILLEENYRSTASILRACMSIVAQDH
SRIQKTLHTSHPDGCCPVLQCFPSEQDEAACIAREIKRLSASSGGMLGWEDFVILLRMNS
LSRSLESALRKEGIPCRVLKGQKFFERLEIKDLLAYLQVVDNPDFVPAFERVINVPPRGI
GDKTLGEILRTAQGRRLSPVALVEHIYDSKIPDIKPSIKRKVGSFVRTVRELRLAAQRMP
ADIIRKLISLTEYEDHLKKTQPDSDARWENVMELMSFASEAAQFDADGLIELKHSAAEGP
GNREALSESNPLRLFLQASQLSGDSGDGGEGGEKEKVTISTCHSAKGLEWPVVFIPAVEE
GTFPFALSEDLNEERRLLYVACTRAQNLLYLSHCNKRLVAGRQIDRKLSAFVASVIEEAP
VRLPGT
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
gtagcggtgcgacacccacatgatattccactgcagatactcgctgggcctggaagtgga
aagacgaagaaggttctcacctctaggattgcatacctgatccttcacgagcatgtccag
ccatcatccatatgcgccgtcacgttcacaaacaaggcagctcgcgagatgaaagaacga
ctcaccaaagtgatcggaaaagcgaaggtcgacgaggtcaagatggggacgtttcatgct
ctctgcgctttgtttctcaggcgttatccaacacgcgtgggcatcaaaagtaactttacc
gtgtgtgacgcggacgaaagtaagaagatcctgaagaaattgctgggctcatacaaggat
tacctagaagaaaggaacatcactctagatgtgcgcagtgtcacttctataatatctaag
gcgaaatctcgaggcgagagctggcgagcccttgctgtccgatcgacctccactatcgaa
ttagcgagtcagaccggccacgatctcaaccgaattattgcagaactatatgaagcctac
gagaagtatctcagagagaataacagcttggacttcgatgaccttctggtttatggcgtc
gagctcttctctcggaataaagaagtaattgcctggtgtacccatgtactcgtggacgag
ttccaagacacaaacacgctgcaatacgagcttatgcggcatatcgcgtccgtctctaga
tgtgtcaccatcgttggggacccggatcaatctatctatggctggcgctcggcggaagtt
gccaatcttgcgaagatgagaatagatttcccttctacagtgcaaatacttctagaagag
aactatcgttcaacggcgtcaatcctacgagcatgtatgtctatcgttgctcaagaccat
tcacgaatacagaagacgctccatacgtcacatcccgatggctgttgccctgtcttgcaa
tgcttcccttcggagcaggacgaggctgcatgcatagcccgagaaatcaagcgattatcc
gcctcctccggagggatgctcggctgggaagatttcgttatcttgctacgcatgaattca
ctgtcccggagtcttgagagtgccctcagaaaagaggggataccttgtagggtcctgaag
ggtcagaagttcttcgagcgcctggagatcaaagacttgctggcgtacctgcaggtcgtc
gataatcccgattttgtcccggcattcgagagagtcattaatgtaccgccgaggggaatc
ggcgataagacactcggagaaatactacgaaccgctcagggtcgtcgcctatcgcctgta
gctcttgttgagcatatctacgattctaaaataccggacatcaagccatccatcaaacgc
aaggttggttcctttgtacgcacggttcgtgaattacgtctggcagcccaaaggatgccc
gccgatataatccgaaagttgatatctctcactgagtacgaagaccatttgaagaaaacg
cagccggattccgacgcccgatgggagaacgtgatggaactaatgagtttcgccagcgaa
gccgctcaattcgacgcggacgggttaatagagctgaagcactccgcggctgaaggccct
ggcaatcgagaggccctatccgagagtaaccctctccggctcttcctccaagcttcgcag
ctctctggtgactctggtgacggaggagaagggggcgagaaggagaaagtcacaatttcg
acgtgccactctgcgaaagggttggagtggccagtcgtattcatcccagccgttgaggaa
gggacgttccccttcgctctatcagaggatctgaacgaagaacgacgtctgctttacgtg
gcgtgtacccgcgcgcaaaacttgctatacctttcacattgcaacaagcgtctggtagcc
ggcagacaaatagacaggaagctatcggcctttgtggcatcggtaatcgaagaagccccc
gtacgtcttcccggcacttga
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