Gloeophyllum trabeum: GLOTRDRAFT_48725
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Entry
GLOTRDRAFT_48725 CDS
T03130
Name
(RefSeq) hypothetical protein
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03022
Basal transcription factors
gtr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GLOTRDRAFT_48725
09124 Replication and repair
03420 Nucleotide excision repair
GLOTRDRAFT_48725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gtr03021
]
GLOTRDRAFT_48725
03400 DNA repair and recombination proteins [BR:
gtr03400
]
GLOTRDRAFT_48725
Transcription machinery [BR:
gtr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
GLOTRDRAFT_48725
DNA repair and recombination proteins [BR:
gtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
GLOTRDRAFT_48725
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb5
DUF5023
Motif
Other DBs
NCBI-GeneID:
19306596
NCBI-ProteinID:
XP_007869886
JGI:
Glotr1_1_48725
UniProt:
S7PW25
LinkDB
All DBs
Position
Unknown
AA seq
56 aa
AA seq
DB search
DSAVKQILLSLNEKEGNSFIIEDLDDHHLVIKADEEYRVRRELEAELEKNTYSLEG
NT seq
171 nt
NT seq
+upstream
nt +downstream
nt
gactccgccgtcaaacagatcctgctctctctcaacgagaaggagggcaacagcttcatc
atcgaggacctggacgaccaccacctcgtcatcaaggccgacgaggagtaccgggtgcgt
agggagctcgaggccgagctggagaagaatacgtacagcttggaggggtga
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