Gloeophyllum trabeum: GLOTRDRAFT_52485
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Entry
GLOTRDRAFT_52485 CDS
T03130
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K10755
replication factor C subunit 2/4
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03030
DNA replication
gtr03410
Base excision repair
gtr03420
Nucleotide excision repair
gtr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GLOTRDRAFT_52485
03410 Base excision repair
GLOTRDRAFT_52485
03420 Nucleotide excision repair
GLOTRDRAFT_52485
03430 Mismatch repair
GLOTRDRAFT_52485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gtr03032
]
GLOTRDRAFT_52485
03036 Chromosome and associated proteins [BR:
gtr03036
]
GLOTRDRAFT_52485
03400 DNA repair and recombination proteins [BR:
gtr03400
]
GLOTRDRAFT_52485
DNA replication proteins [BR:
gtr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
GLOTRDRAFT_52485
DNA Replication Termination Factors
ELG1-RFC complex
GLOTRDRAFT_52485
Chromosome and associated proteins [BR:
gtr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
GLOTRDRAFT_52485
DNA repair and recombination proteins [BR:
gtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
GLOTRDRAFT_52485
Check point factors
HRAD17(Rad24)-RFC complex
GLOTRDRAFT_52485
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_16
AAA_14
RCF1-5-like_lid
nSTAND3
RuvB_N
Viral_helicase1
AAA_3
Mg_chelatase
Rad17
MeaB
NTPase_1
AAA_assoc_2
AAA_24
Gp44_lid
AAA_19
RNA_helicase
DNAX_ATPase_lid
ABC_tran
AAA_11
AAA_18
ATPase_2
SRP54
Motif
Other DBs
NCBI-GeneID:
19306882
NCBI-ProteinID:
XP_007860351
JGI:
Glotr1_1_52485
UniProt:
S7QLR0
LinkDB
All DBs
Position
Unknown
AA seq
341 aa
AA seq
DB search
MTLSVKGKEKANGAADTYELPWVEKYRPHVLDDIVGNTETIERLKVIARDGNCPHIIISG
MPGIGKTTSIHCLAHQLLGDAYKEGVLELNASDERGIDVVRNKIKTFAQKKVTLPPGRHK
IIILDEADSMTAGAQQALRRTMEIFSNTTRFCLACNMSNKIIEPIQSRCAILRYAKLRDA
EILKRLLEICEAEKVQYNDDGLTALIFTSEGDMRQAINNLQSTWSGFGFVSGDNVFKVCD
QPHPITVQAIIRACTKGDINDAMDKLSELWAQGYSAVDIVVTIFRVVKTSDELPEYTKLE
FIKEIGFTHMRILEGVGTLIQLGGLMARLCKMNMKPELLRI
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgactttatcggtcaaggggaaagagaaagccaacggcgccgctgatacctacgaactt
ccctgggtagagaagtacagaccacatgtcctcgacgacatcgtagggaacacagagacc
atcgagcgcctgaaggtcatcgcgcgcgacgggaattgtccgcatatcatcatatcgggc
atgcctgggatcggaaagaccacaagtatacactgcctggcacatcagttactcggtgac
gcttataaggagggggtactggagttgaatgcgtcagatgagagaggtattgatgtggtt
cggaacaagatcaaaacgtttgcacagaagaaggtcacactacctccgggacggcacaaa
atcatcatactggacgaggcagacagtatgacagcaggagcccagcaagcactacgtcga
accatggagatcttctcgaatacaacacgcttttgcttggcatgcaacatgtccaataag
atcatcgagcccatacaaagtcgatgcgctatcttgaggtatgccaagctgcgagacgcg
gaaattttaaagcggctgttagagatatgtgaggcggagaaggtccaatataacgacgat
ggcctaacagcattgatattcacgtcagaaggagacatgcggcaggccatcaacaatctt
cagtcgacttggtcagggttcggatttgtatcgggggacaacgtcttcaaagtgtgcgac
cagccccatcccatcactgtccaagctattattcgtgcatgcacaaaaggggatatcaat
gacgctatggacaagctgtctgagttgtgggctcaaggttacagcgctgttgatatcgtt
gtcacgatattccgagtggttaagacgtcagacgaattgccagagtataccaaactcgag
tttattaaggagattgggttcacgcatatgcgcatcctagaaggggtgggtaccttgata
caactcgggggtcttatggcacgcctgtgtaagatgaacatgaagcctgaactcctgcga
atatga
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integrated database retrieval system
