Gloeophyllum trabeum: GLOTRDRAFT_52582
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Entry
GLOTRDRAFT_52582 CDS
T03130
Name
(RefSeq) WD40 repeat-like protein
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GLOTRDRAFT_52582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gtr03009
]
GLOTRDRAFT_52582
Ribosome biogenesis [BR:
gtr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
GLOTRDRAFT_52582
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR75_1st
Beta-prop_WDR75_2nd
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WDR55
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_Nup120_160
WD40_MABP1-WDR62_1st
Beta-prop_IP5PC_F
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
19306890
NCBI-ProteinID:
XP_007860358
JGI:
Glotr1_1_52582
UniProt:
S7QKT7
LinkDB
All DBs
Position
Unknown
AA seq
997 aa
AA seq
DB search
MAATKAKHPASRQPRDTHPSPGHLSSPKIVKSKKGKSKEEDATSVAQKGKGRKEPDELTE
HITWSWTSLTDSWVSRQPPVFTKDGSYFFSIVGSSVKIYSSTTGQVVSTLSASPSGSSAS
KFSQGNGHTDSITAAVLSPTNPFQLITASLDGCIKVWDFLEADLLQTIDLAQPILHLCAH
QNFKDHVFVSVARPGSSKEDNNAVLRVSLKPSAATAGSAYQKSSEILAVGKTRSTCGLAV
SPSGQWLVAAAGHKAYVAQTSALKSGFTKFVSPEALTCLAFHPSEEYFATGDVKGHIRLW
YCLNEEIIRSHSAVGVEKKAQTTTLHWHAHAVSGLAFTVNGAYLLSGGEESVLVIWQLHT
GKKEFIPRVGSPILSIAVCRARDREEEYILGLADASFAVIDAGSLKIMRSFSRIKLDSTA
PLGKHLTSFPVPLAYHGPTSSLVLPSSHPSSLQTYSPTQHKLLSELEVSPSNRVSRRDEK
SLEPSRVLRVAVASSGEWMATLDSREGDDTFHREIYLKLWQWNARAGIWSLNTRIDRPHG
DKQVSTVVFHPDRRRPLIVTTGEDGKVRGWGIRTTVDKNGGQEDFWVARSALDFRSEVPT
HASWSPDGSLLLVSFGSHVVLCDSITGVINTALTSPQCKSARSAHFVGTEGRYVAVVGSH
DIVLWDLISQTVRWHRRCSIAISAVVPHPLDDSVAVFYSSWGADLVTTVEVLSTSSERPI
RKRSLPFHLLTVSPYPVHHVSSSHKSLYALVAITSSWNVVLLGDYVAAGDEQASCAQVIP
DPAGSARRPTLFQDIFGKSAFADTSNPRSEQIPATSSYSWDSKDAAAVLDGPAHLIPPIE
SVFDSLMGSFLKPRLPCSQEAAHIADESDEGMDEDVDVDMDVTQDTAPVVISRSSERVVS
VEEMDMFVELFKQHAINGHRPNISQVNGKKTNGTQVHPNGYTPRHPVPAQTNGYHQLSPQ
SVLSTPAKSLKNGVLHQHSGSPVAPLTAGKKRKKSLG
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgaccaaagctaaacatccagcttcgagacagcctcgggatacgcacccctct
cctggtcatctcagttcaccaaaaatcgtgaagtcgaaaaaggggaagagtaaagaggag
gacgctacatccgtagcgcagaaagggaagggaaggaaagagcctgatgagcttacggag
catataacatggtcatggacgtcgctcacggactcatgggtcagtcgtcaaccacctgta
tttaccaaggatgggagctacttcttctcgatcgtagggtcgagtgtgaagatttattct
agcaccaccgggcaagtcgtgtcaacactgtccgcgtccccgtctggcagttctgcgtct
aagttctcccaaggaaatggtcacacagactccataacggcggccgtcctcagtcctacc
aatcccttccagttgatcaccgcgtctttggacggttgtatcaaggtctgggacttccta
gaggcagatctcctacagacaattgacctcgctcaacctatactgcacctatgcgcgcac
caaaacttcaaagatcacgttttcgtctccgtcgcacgacctgggagctccaaagaggac
aacaatgctgttcttcgggtttcgttaaagccgagtgctgctacggctgggtcggcgtac
caaaaatcctctgagattctcgccgtggggaagactcgatcgacgtgtggcctagctgtg
tctccgagcggacagtggctcgtagctgctgctggacacaaggcttacgtagcgcagact
tcggctctgaaatctggttttaccaagttcgtgtcccccgaggcgctcacttgtctggcg
ttccatccttcagaggaatacttcgccactggcgatgtcaagggtcacattcggctatgg
tattgtctcaacgaggagatcatacggagccactccgctgtcggtgtcgagaagaaagct
cagacaacaaccctgcactggcacgcgcatgctgtttcaggtctcgccttcacggtcaac
ggtgcatatctccttagcggtggcgaggagtccgttctggtgatttggcagcttcatacc
ggaaaaaaggaatttattcctcgcgtcggatcgcccatcttgagcatagcggtatgcagg
gccagggaccgtgaagaagagtatatcttaggtctggcggatgctagtttcgccgtaata
gatgctggttcattaaagatcatgagatctttctctcgcataaagctagattcaacagca
ccgctagggaaacacttgacctcgtttcctgtacctttggcctaccatggccctacctct
tctctcgtactaccttcatcccatccatcatccttacaaacgtactcccccacgcaacac
aaactgctgtcggagctcgaagtctcaccctcgaatcgagtctctcgacgggacgaaaag
agcctagagccatctagagtacttcgcgtcgccgtcgcgtcaagtggagagtggatggca
actttggacagtcgggaaggtgatgatactttccacagggagatctacctcaagctttgg
cagtggaacgcccgagctggaatatggtcgctcaataccagaattgacagaccacatggc
gataaacaggtttcgactgtagtcttccatcctgatcgtcgtcgaccactaatagtgacc
accggagaagacgggaaagttaggggatgggggattcggactaccgtagacaagaatgga
gggcaggaagatttctgggtcgcgcgatctgctctcgatttccggtcagaagtgccgacg
cacgcctcatggtcgccagacggatcgctactgctcgtctcattcggcagtcatgtcgtt
ctttgtgactctataacgggtgtgatcaacacagcactgacgtcgccccagtgcaaatct
gctcgttcggcccatttcgttggcactgaagggcgatatgtagctgttgtaggatcccac
gatattgtcctatgggacttgatatcgcagacagtgcgatggcatcgccgatgctccatc
gccattagtgcagtcgtgccccatccccttgatgattcggtagctgtattttattcctcg
tggggtgccgatcttgtcacgactgtcgaggtcctgtctacatcatcagagaggcctatc
aggaagcgcagtttacccttccaccttctcaccgtttcgccctatccagtgcatcacgta
tcgtcctctcacaagtctctatatgcgcttgttgcgatcacctcgtcgtggaatgtggta
cttcttggtgactacgtggctgcgggcgacgaacaggctagttgtgctcaggttatccct
gatccagcgggctctgctcgtaggccgactctattccaggatatcttcgggaagtcagca
tttgcggatacctcaaatccgcgctcggaacagattccagctacaagctcttattcatgg
gactcgaaggatgccgctgctgtacttgatgggcctgctcatctaataccaccgattgag
agcgtattcgactcccttatgggtagcttcttgaagcctcggctcccttgctcccaggag
gcggctcacatagcagatgagtctgacgaagggatggatgaagacgtcgatgtcgatatg
gatgtcacgcaagacactgcgccggtcgtcattagtcgcagctccgagagggtcgttagc
gtggaggagatggatatgtttgttgaactgtttaagcaacacgccatcaatggccaccgt
ccaaacatatcccaggtgaatgggaaaaaaaccaacggaactcaagtgcatcctaatggg
tacacacctcgtcaccctgttcccgctcaaacgaacggctaccatcaactcagtccccag
tccgtcctttcaacacctgccaaatcactgaagaacggagtgcttcatcagcacagcggc
agtcctgtggcacctctcacggctggtaaaaagcgcaagaaatctctaggttag
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