KEGG   Gloeophyllum trabeum: GLOTRDRAFT_53405
Entry
GLOTRDRAFT_53405  CDS       T03130                                 
Name
(RefSeq) RNA polymerase
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
gtr  Gloeophyllum trabeum
Pathway
gtr03020  RNA polymerase
gtr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    GLOTRDRAFT_53405
  09124 Replication and repair
   03420 Nucleotide excision repair
    GLOTRDRAFT_53405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gtr03021]
    GLOTRDRAFT_53405
   03400 DNA repair and recombination proteins [BR:gtr03400]
    GLOTRDRAFT_53405
Transcription machinery [BR:gtr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     GLOTRDRAFT_53405
  RNA polymerase III system
   RNA polymerase III
     GLOTRDRAFT_53405
  RNA polymerase I system
   RNA polymerase I
     GLOTRDRAFT_53405
DNA repair and recombination proteins [BR:gtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      GLOTRDRAFT_53405
SSDB
Motif
Pfam: RNA_pol_Rpb8
Other DBs
NCBI-GeneID: 19306925
NCBI-ProteinID: XP_007860393
JGI: Glotr1_1_53405
UniProt: S7QMR3
LinkDB
Position
Unknown
AA seq 157 aa
MASNSSNIVFDDIFTIEDIDKEGKKFDRVSRLYARSKNYDMHLTLDYNVELFPLQKDQSF
ALALASSLVRGGAPAGGATEEEEKDKDVWRPDGKGRRGLEEDYDYVMYGKVYKFDGGTAE
MVTAYASFGGLLMSLYGSFRHMTSIVLGDPVYLLMRK
NT seq 474 nt   +upstreamnt  +downstreamnt
atggcttcaaattcatcaaatattgtcttcgatgatattttcaccatcgaggatatagac
aaggaggggaagaagttcgatcgcgtttctcgcctatatgcacgatctaagaactatgat
atgcacttgaccctggactacaatgttgagctgttcccgttacagaaggatcaaagcttc
gcactcgctttagcctcgtccctggttagaggaggcgcacctgctggaggcgctactgag
gaagaggaaaaggacaaggatgtatggagaccggatgggaagggcagaagaggcttagag
gaggactatgactacgtgatgtacggcaaggtgtacaaatttgacggtggaacggctgag
atggttaccgcgtatgcgtccttcggtggtctcctcatgtcactctatggatctttccgg
cacatgacaagtatcgtcctcggcgaccctgtatacctactgatgcgcaaataa

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