Gloeophyllum trabeum: GLOTRDRAFT_53411
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Entry
GLOTRDRAFT_53411 CDS
T03130
Name
(RefSeq) Sm-like ribonucleo protein
KO
K11096
small nuclear ribonucleoprotein D2
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GLOTRDRAFT_53411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gtr03041
]
GLOTRDRAFT_53411
03032 DNA replication proteins [BR:
gtr03032
]
GLOTRDRAFT_53411
Spliceosome [BR:
gtr03041
]
Complex A
U1 snRNP components
Sm proteins
GLOTRDRAFT_53411
U2 snRNP components
GLOTRDRAFT_53411
Complex B
U1 snRNP components
GLOTRDRAFT_53411
U4/U6.U5 tri-snRNP components
GLOTRDRAFT_53411
Complex C
U2 snRNP components
GLOTRDRAFT_53411
DNA replication proteins [BR:
gtr03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
GLOTRDRAFT_53411
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
19306926
NCBI-ProteinID:
XP_007860394
JGI:
Glotr1_1_53411
UniProt:
S7QN67
LinkDB
All DBs
Position
Unknown
AA seq
111 aa
AA seq
DB search
MSQYVHVPKSELDEAQLRQLEEHEISQGPLSVLQQAVRNHTQVLISLRNNKKLLARVKAF
DRHSNMVLENVKEMWTEVPKGKNKKPVNKDRFISKMFLRGDSVILILRNQA
NT seq
336 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaatacgtacacgtcccaaagtctgaactggatgaggcccagcttcggcaactc
gaggaacatgagatcagtcaaggtcctctctccgtcctacagcaagccgtcaggaaccac
actcaggttctcatttcgttacggaacaataaaaagcttttggctagagtgaaggcattc
gatagacatagtaatatggtgctagaaaacgtgaaggagatgtggacggaagtgcccaaa
ggcaagaacaaaaagcctgtaaataaggatcgcttcatcagcaagatgttcttaagaggt
gactccgtaatactgattctacgtaatcaagcatag
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