KEGG   Gloeophyllum trabeum: GLOTRDRAFT_53785
Entry
GLOTRDRAFT_53785  CDS       T03130                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K12816  pre-mRNA-processing factor 17
Organism
gtr  Gloeophyllum trabeum
Pathway
gtr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GLOTRDRAFT_53785
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gtr03041]
    GLOTRDRAFT_53785
Spliceosome [BR:gtr03041]
 Complex C
  Other components
   Step II factors
    GLOTRDRAFT_53785
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WDR55 WD40_WDHD1_1st EIF3I Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_EML Beta-prop_SPT8 Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_RIG_2nd WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_Vps41 Beta-prop_NWD2_C WD_LRWD1 WDR54
Other DBs
NCBI-GeneID: 19306950
NCBI-ProteinID: XP_007860418
JGI: Glotr1_1_53785
UniProt: S7QNG2
LinkDB
Position
Unknown
AA seq 579 aa
MIVDYSSDDEAGPSKTQDVFNLSSLPVTKKPRVEEQPSRPVAANAAPDVLAEDPLHQTSL
ITRPTDTQMHVNIPLESMTLPTQGPENPFGPTNRFATQNALAGHVEEQEMTDHAFRQQHL
TYSILGYSANPSIDPNAPALLGNAEAAAANGYATLGSLSVPKERRKELKRKRKAKGDLEI
VDGEGAYVGPWASWEGDEPQGILPEGADVEEEEDDEDEPEEEIKTKKAKPKRGAPGQETS
VFHGKSMTDYQGRTYMHPPISEAPQLQEEPGSQECFIPKVCVHTWTGHTNAVSVIRLFPQ
TGHLMLSGSMDTKIKLWDVYTSGNCLRTFHGHVKAVKDLAFSNDGRRFLSCSYDRSMKLW
DTETGQCLKRFSNGKIPYCIKFHPDEDKQHIFLAGMSDKKIVQYDMNSGEITQEYDQHLG
PVNTITFVDENRRFVTTSDDKTIRAWDWDIPVVIKYIAEPYMHSMPAVTLHPSNKYFAAQ
SLDNQILIYSTDTFRQNRKKRFAGHTVAGYACQVGFSPDGKWISSGDAEGNVVFWEWKTG
RIKKRLMAHSKVVIAHEWLPHETSKVVTASWDGLIKLWD
NT seq 1740 nt   +upstreamnt  +downstreamnt
atgatcgtcgactattcgtctgacgacgaggcggggccctcaaaaacccaggatgtcttc
aatctctcatctttgccggtgacgaagaaaccacgcgtggaggagcagccttcgcggcca
gtggcggctaatgcagccccagatgttctggctgaggaccccctccaccaaacgtccctc
atcacgcgcccgaccgacacccaaatgcacgtcaacatccctctcgagtccatgaccctc
cccacccagggccccgagaatcccttcggtcctacgaatcgatttgctacgcagaacgcg
ttagccggccatgtggaggaacaggagatgaccgaccacgcgttccggcagcaacatctg
acctattccattctcgggtactcggccaacccttcaatagatcccaatgcgccggcactt
ctaggtaacgctgaagctgccgccgccaatgggtacgcaacgctcggctcgctatcggtc
ccaaaagagcggaggaaggaactcaaacgcaagagaaaggccaaaggtgatcttgagatt
gtggatggcgaaggcgcctatgtcgggccatgggcgtcatgggagggtgacgagccacaa
ggcattctcccagagggcgctgacgtggaggaagaagaagacgacgaagacgaacctgag
gaagagatcaagaccaaaaaggccaaacctaagcgcggtgcaccgggtcaagagacatct
gttttccacggcaagtcaatgaccgactatcagggccggacatacatgcacccgcctata
tcggaggcaccacaattgcaggaagagccagggtctcaagaatgcttcattcccaaagtt
tgtgtgcacacttggactgggcatacgaacgcagtctcggttatacggctattcccccaa
actggccatctcatgttgagtgggtcgatggacactaagatcaagctttgggacgtttat
acgagtggcaactgcttaaggaccttccacgggcacgtgaaggccgtaaaggacctggcc
ttttccaacgatggccgcaggttcctttcgtgttcctacgaccgcagcatgaagctgtgg
gacacggagaccggacaatgtctgaaacggtttagcaacggcaagatcccatactgtata
aagtttcacccggacgaggataaacaacatatcttcttagccggcatgagtgataagaag
attgtacagtacgacatgaattcgggcgagattacccaggaatacgaccagcatctcggg
cccgtgaacaccatcactttcgttgacgaaaatcgacggtttgtcaccacctccgacgac
aagactatccgggcatgggattgggacatccccgtggtgatcaagtatattgccgaaccc
tacatgcactcaatgcctgccgtgactctacacccatccaacaaatatttcgccgcccag
tccttagacaaccaaatccttatatatagcacggatactttccgacaaaaccgcaagaag
cgatttgctggtcatacggttgcgggttacgcatgccaggtcggcttttcacccgacgga
aagtggatctcgagtggggacgccgaggggaatgtggtattctgggagtggaagaccggc
aggatcaagaagaggttgatggcccactccaaggtagtcatcgcccatgagtggctaccg
catgagacttctaaggttgtcaccgcatcgtgggacggcctgataaaactatgggactaa

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