Gloeophyllum trabeum: GLOTRDRAFT_53785
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Entry
GLOTRDRAFT_53785 CDS
T03130
Name
(RefSeq) WD40 repeat-like protein
KO
K12816
pre-mRNA-processing factor 17
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GLOTRDRAFT_53785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gtr03041
]
GLOTRDRAFT_53785
Spliceosome [BR:
gtr03041
]
Complex C
Other components
Step II factors
GLOTRDRAFT_53785
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_EML
Beta-prop_SPT8
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_Vps41
Beta-prop_NWD2_C
WD_LRWD1
WDR54
Motif
Other DBs
NCBI-GeneID:
19306950
NCBI-ProteinID:
XP_007860418
JGI:
Glotr1_1_53785
UniProt:
S7QNG2
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MIVDYSSDDEAGPSKTQDVFNLSSLPVTKKPRVEEQPSRPVAANAAPDVLAEDPLHQTSL
ITRPTDTQMHVNIPLESMTLPTQGPENPFGPTNRFATQNALAGHVEEQEMTDHAFRQQHL
TYSILGYSANPSIDPNAPALLGNAEAAAANGYATLGSLSVPKERRKELKRKRKAKGDLEI
VDGEGAYVGPWASWEGDEPQGILPEGADVEEEEDDEDEPEEEIKTKKAKPKRGAPGQETS
VFHGKSMTDYQGRTYMHPPISEAPQLQEEPGSQECFIPKVCVHTWTGHTNAVSVIRLFPQ
TGHLMLSGSMDTKIKLWDVYTSGNCLRTFHGHVKAVKDLAFSNDGRRFLSCSYDRSMKLW
DTETGQCLKRFSNGKIPYCIKFHPDEDKQHIFLAGMSDKKIVQYDMNSGEITQEYDQHLG
PVNTITFVDENRRFVTTSDDKTIRAWDWDIPVVIKYIAEPYMHSMPAVTLHPSNKYFAAQ
SLDNQILIYSTDTFRQNRKKRFAGHTVAGYACQVGFSPDGKWISSGDAEGNVVFWEWKTG
RIKKRLMAHSKVVIAHEWLPHETSKVVTASWDGLIKLWD
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcgactattcgtctgacgacgaggcggggccctcaaaaacccaggatgtcttc
aatctctcatctttgccggtgacgaagaaaccacgcgtggaggagcagccttcgcggcca
gtggcggctaatgcagccccagatgttctggctgaggaccccctccaccaaacgtccctc
atcacgcgcccgaccgacacccaaatgcacgtcaacatccctctcgagtccatgaccctc
cccacccagggccccgagaatcccttcggtcctacgaatcgatttgctacgcagaacgcg
ttagccggccatgtggaggaacaggagatgaccgaccacgcgttccggcagcaacatctg
acctattccattctcgggtactcggccaacccttcaatagatcccaatgcgccggcactt
ctaggtaacgctgaagctgccgccgccaatgggtacgcaacgctcggctcgctatcggtc
ccaaaagagcggaggaaggaactcaaacgcaagagaaaggccaaaggtgatcttgagatt
gtggatggcgaaggcgcctatgtcgggccatgggcgtcatgggagggtgacgagccacaa
ggcattctcccagagggcgctgacgtggaggaagaagaagacgacgaagacgaacctgag
gaagagatcaagaccaaaaaggccaaacctaagcgcggtgcaccgggtcaagagacatct
gttttccacggcaagtcaatgaccgactatcagggccggacatacatgcacccgcctata
tcggaggcaccacaattgcaggaagagccagggtctcaagaatgcttcattcccaaagtt
tgtgtgcacacttggactgggcatacgaacgcagtctcggttatacggctattcccccaa
actggccatctcatgttgagtgggtcgatggacactaagatcaagctttgggacgtttat
acgagtggcaactgcttaaggaccttccacgggcacgtgaaggccgtaaaggacctggcc
ttttccaacgatggccgcaggttcctttcgtgttcctacgaccgcagcatgaagctgtgg
gacacggagaccggacaatgtctgaaacggtttagcaacggcaagatcccatactgtata
aagtttcacccggacgaggataaacaacatatcttcttagccggcatgagtgataagaag
attgtacagtacgacatgaattcgggcgagattacccaggaatacgaccagcatctcggg
cccgtgaacaccatcactttcgttgacgaaaatcgacggtttgtcaccacctccgacgac
aagactatccgggcatgggattgggacatccccgtggtgatcaagtatattgccgaaccc
tacatgcactcaatgcctgccgtgactctacacccatccaacaaatatttcgccgcccag
tccttagacaaccaaatccttatatatagcacggatactttccgacaaaaccgcaagaag
cgatttgctggtcatacggttgcgggttacgcatgccaggtcggcttttcacccgacgga
aagtggatctcgagtggggacgccgaggggaatgtggtattctgggagtggaagaccggc
aggatcaagaagaggttgatggcccactccaaggtagtcatcgcccatgagtggctaccg
catgagacttctaaggttgtcaccgcatcgtgggacggcctgataaaactatgggactaa
DBGET
integrated database retrieval system