Gloeophyllum trabeum: GLOTRDRAFT_54048
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Entry
GLOTRDRAFT_54048 CDS
T03130
Name
(RefSeq) hypothetical protein
KO
K11786
ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
Organism
gtr
Gloeophyllum trabeum
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gtr03021
]
GLOTRDRAFT_54048
03036 Chromosome and associated proteins [BR:
gtr03036
]
GLOTRDRAFT_54048
Transcription machinery [BR:
gtr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SWI/SNF complex
GLOTRDRAFT_54048
RSC complex
GLOTRDRAFT_54048
Chromosome and associated proteins [BR:
gtr03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
GLOTRDRAFT_54048
SWI/SNF complex
GLOTRDRAFT_54048
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
HSA
SnAC
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
19306966
NCBI-ProteinID:
XP_007860434
JGI:
Glotr1_1_54048
UniProt:
S7QNR4
LinkDB
All DBs
Position
Unknown
AA seq
1472 aa
AA seq
DB search
MAAPMPASMSVPNMGQNGAHNLTPQQQQELYNAKQAKDRMQQLWHRAQMLRQNGATPENS
EELAKIMRAIAMFQQQFAQNRPQPQDHHQSAPQPVVNGHAPTPSTSMSNGTPVPNGNPLT
TGSVPAQPYPTASTTPVSFTPDQINALRVQIYAFKMLQRGMPVPDVVQKALHSPYQNIPE
LEKLLQGSDVNARVIDNAVKVQKAVDGGATDSPIPDAIKTEEQEPLPNAADYPKGPFLED
NVDSGIYPYNAFVHPFTHLKQITENPALFATRLQRLLIPSIMPSGLDPHQIVAERNRYIE
ARMAQRVRELEALPATMGDGGMDGVLEDANEKQEELKIEDLQSLVHPSPNAHGKLRAMIE
LKSLRVVDKQRALRAMVAERLTHGSLLPLNRTDFRRSRKPTIRDARMTEQLERKQRVERE
RRAKQKHVEQLGVICTHGKEVLAVNRAAQDRIVRLGKAVLSFHAHTEKEEQKRVERISKE
RLKALKADDEEAYMKLIDTAKDTRITHLLKQTDAYLDSLAQAVLEQQNDDVHKNTLALPF
EVEEGPVGEATFGAKNTLEDEPVDPNRDKKLDYYAVAHRIKEKITKQPSILVGGTLKDYQ
IKGLQWMVSLYNNRLNGILADEMGLGKTIQTISLITFLIECKKERGPFLVIVPLSTMTNW
SGEFAKWAPSVKMIAYKGSPTQRKALQSELRGNNFQVLLTTYEYIIKDRPVLSKIKWVHM
IIDEGHRMKNTQSKLAQTLTQYYHSRYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKS
FDEWFNTPFANSGTGDKIELNEEEALLIIRRLHKVLRPFLLRRLKKDVESELPDKVEKVM
KVRMSALQAQLYKQMKKYKMIADGKESKGNRSGGVKGLSNELMQLRKICQHPYLFESVED
RINPSGLIDEKLIRTSGKIELLSRILPKFFATDHRVLIFFQMTKVMDIMEDFMKMMGWKY
LRLDGGTKTEERAGHVALFNEPNSEYKVFILSTRAGGLGLNLQTADTVIIFDTDWNPHAD
LQAQDRAHRIGQTKTVRILRFITEKSVEEHMYARARYKLDIDDKVIQAGRFDNKSTQEEQ
EEFLRLILEADQEEENEEAGTMNDDEINEIIARSDEEVIIFKQMDIERERAREQAWRAAG
NRGKPPPPLMQLEELPECYQTDEPFEAKEDELGLEGRGHRRRNVVNYNDGLSDEQWVMAL
EDGEDIEEIAERNRDKKDRRATNKLLRDAEVSGVATPVSDTDSRGRKGRKGKSKMAELDF
DTPTNGKRKRGMKSMSVTPSINDEEEEDRDAKRRKTKAADIPAAVRDRMKKAFMECYKAV
LACTDETGRKRCELFRELPDKRDYPDYYQLIGQPIALSHIRKRSTSNYYKDVQQFRNDWK
LMFSNARTYNQEGSWVYIDAEEMEKVFDATFDRVLAGSGLPGAPAAAAATGGTDDTALTP
MEEDERPPPRSKSKGRRQIVSDEEYLTPSDEE
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcctatgcccgcgtcgatgtccgtccccaatatgggccagaatggcgcccac
aacctgacacctcagcagcagcaggagctctataatgcaaagcaggcaaaggaccgtatg
cagcagctctggcatagggcgcaaatgctcagacagaacggggcgactccggagaacagc
gaagaactggcaaagataatgagggccattgcgatgttccaacaacaattcgcccaaaac
cgacctcagccccaggatcaccaccagtctgcacctcagccagttgttaatggccatgct
cctacgccatccacatcaatgtccaatgggacacccgtccccaatggcaatcctcttacc
actggatcagtacccgcgcagccttatcctaccgcttccactactcctgtctctttcacg
cctgaccagatcaatgcgctccgggtccagatctatgccttcaagatgctgcagcgtggt
atgcccgttcccgacgtcgtccagaaagcacttcattccccgtatcaaaacatacccgag
ctagagaagcttctccagggcagcgacgtcaacgctagagtaatagacaacgctgtgaaa
gtccagaaggctgtcgacggcggcgctaccgactccccgatccctgacgccatcaagacc
gaggagcaggaaccattgcccaacgccgctgactatccgaaagggccgttcctggaggac
aatgtcgactctgggatatacccgtataatgcttttgttcatcctttcacccacctcaag
cagatcaccgagaatcctgccttgttcgcgacccgcctccagcgactcctcataccgtcc
atcatgccgtctggccttgatcctcatcagattgtcgcagagcggaatcgctatatcgag
gcccgcatggcacaaagggtgcgtgagctcgaggccttgcccgctaccatgggcgacggt
ggcatggacggcgttcttgaggatgcaaacgagaagcaggaagagctgaagattgaggac
ttgcagagtctcgtgcatccaagtcccaatgcccacgggaagttgcgggcaatgattgag
ctcaagtctcttcgggtcgtcgataagcagcgcgcgttacgagctatggtcgccgagcgc
ttgacgcatggctccctgcttcccctcaatcgtacggacttccgccggtcaaggaaacca
accatccgggatgctcgaatgacagagcaattggagcgaaagcaaagggttgagagagag
cggcgggcgaagcagaaacatgtcgagcagcttggcgttatttgtacccatggcaaggag
gtgctggcggtcaacagagctgcccaggacagaatcgtcaggcttggtaaggccgttttg
tcattccatgctcatacggagaaggaagagcagaagagagtggagaggatctccaaggag
cgcctcaaggccctcaaggctgacgatgaggaagcgtacatgaagctgatcgatactgcg
aaggatacccgtatcacgcacttgctcaagcagacggatgcttacctcgactccctggcc
caggcagtgctggagcagcagaatgacgatgtgcacaagaatacacttgcgttgcccttc
gaggtcgaggaagggccagttggcgaggcgactttcggagcgaagaataccctggaagac
gagcctgtcgaccctaatcgtgacaagaagctggactactatgccgtggcgcacaggatt
aaggagaagatcactaagcagcccagtattcttgttggcggcaccctcaaggactaccag
atcaaagggctgcagtggatggtcagtctgtacaacaatcgtttgaacgggatcctcgca
gatgagatgggtctgggaaagaccatccaaactatatcgctcattacattcctcatcgaa
tgtaagaaggagaggggccctttcctcgtcatcgtgccactgtcgaccatgaccaactgg
agcggagaattcgctaagtgggctcctagcgttaagatgattgcatataagggcagccct
acccagcgtaaagccctgcagtccgagcttcggggcaataatttccaagtgttgttaact
acctacgagtatattatcaaggatcgccccgtcctttcgaagatcaagtgggtacacatg
atcatcgatgagggtcatcgtatgaagaacacacagagcaaactcgctcagactctaacg
cagtactaccactcccggtaccgcctcatcttgaccggcacacccctgcagaataacctt
cctgaactctgggcccttcttaacttcgttctaccaaagatctttaactccgtcaaatcc
ttcgatgagtggttcaacacgccctttgccaattcaggcactggtgataagatcgagctt
aacgaagaggaggcgctgctcatcattcgtcgtctgcacaaggtgctgcggcccttctta
ctgaggcgtttgaagaaggacgtggagtctgagctgccggacaaggtggagaaggtgatg
aaggtcaggatgagtgctctacaggcgcaattgtacaagcaaatgaagaagtacaagatg
atcgcagacgggaaggagagcaaaggcaacagatcaggcggtgtaaagggccttagtaat
gagcttatgcagctgcgaaagatctgtcagcatccgtatctctttgagagtgtcgaggat
aggatcaatccgagcggcctcatcgacgagaagctcattcgtacttctggaaaaatcgag
ctgctctctcgtatcttgcccaagttctttgccaccgaccatagagttctgatattcttc
cagatgactaaggtcatggacattatggaagatttcatgaagatgatgggatggaaatat
ctgcgactggacggtggtacgaagaccgaagagcgtgctggccatgtcgccctcttcaat
gaaccaaactccgaatataaagtcttcatcctgtctacaagggctggtggtctcggtttg
aacttgcagacggcagacactgtcatcatcttcgacacggattggaatcctcatgctgat
ctccaagctcaagatcgtgcgcatcgtatcggtcaaacgaagaccgttcgcatcctgcgt
tttatcactgagaagagtgtcgaggagcatatgtatgctcgcgctcggtacaagcttgac
attgacgacaaggttatccaagccggtcgctttgataacaagtccactcaggaagagcaa
gaagagttcttgcgtctcatccttgaagctgaccaggaggaagagaacgaggaagctggt
accatgaacgacgacgaaatcaacgagattattgcgcgtagtgatgaggaagtcattata
ttcaaacagatggatatagagagggagcgcgcgagggagcaggcttggagggccgctggt
aaccgtgggaaaccaccaccacctttgatgcagcttgaagagctgcctgaatgctaccag
accgacgagccattcgaagccaaggaggacgagcttggacttgagggcagaggtcatcgt
cgcaggaatgttgtcaactataacgatggattgagcgacgaacagtgggtgatggcccta
gaggatggggaggatatagaggaaatcgctgaacggaatcgtgacaagaaggatcgccgg
gctactaacaagctattgcgagacgccgaggtatcgggagttgcgacgccggtttctgat
accgactctcgcgggaggaaggggaggaaaggcaaatcgaaaatggctgagcttgacttt
gacacccctaccaatggtaaacggaaacgtggcatgaagtctatgtccgtaacgccgtcc
atcaacgacgaagaggaagaggatcgcgatgctaaacgtcgcaagacaaaggctgccgac
attcctgctgctgtacgcgaccgcatgaagaaggcgttcatggaatgctacaaggccgtt
ctggcatgcacggatgagaccggccgaaaacggtgcgaactgttcagggagcttccagac
aaacgagattatccggattactaccagcttattgggcagcctattgctctgtcccatata
cgcaagcgtagcacgtcgaactactacaaggatgtccagcaattccggaacgactggaaa
ctcatgttcagcaatgcccggacctacaaccaagaagggtcctgggtgtacatcgacgcg
gaggagatggagaaagtgttcgatgccacgttcgatcgtgtccttgctggctccggtttg
ccaggagctcccgctgccgctgctgccacagggggaacggatgatactgctctgactccc
atggaggaggacgagcgtcctccccccagaagcaaaagtaagggacggagacaaatcgtc
agcgatgaggagtatctcactcccagcgacgaggagtga
DBGET
integrated database retrieval system
