Gloeophyllum trabeum: GLOTRDRAFT_56284
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Entry
GLOTRDRAFT_56284 CDS
T03130
Name
(RefSeq) DEAD-domain-containing protein
KO
K03257
translation initiation factor 4A
Organism
gtr
Gloeophyllum trabeum
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtr03019
]
GLOTRDRAFT_56284
03012 Translation factors [BR:
gtr03012
]
GLOTRDRAFT_56284
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gtr04147
]
GLOTRDRAFT_56284
Messenger RNA biogenesis [BR:
gtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
GLOTRDRAFT_56284
mRNA cycle factors
Stress granule specific factors
GLOTRDRAFT_56284
Translation factors [BR:
gtr03012
]
Eukaryotic type
Initiation factors
eIF-4
GLOTRDRAFT_56284
Exosome [BR:
gtr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GLOTRDRAFT_56284
Exosomal proteins of bladder cancer cells
GLOTRDRAFT_56284
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
CMS1
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
19307098
NCBI-ProteinID:
XP_007862988
JGI:
Glotr1_1_56284
UniProt:
S7RT12
LinkDB
All DBs
Position
Unknown
AA seq
397 aa
AA seq
DB search
MSAEEQLQDVQEGEIESNWDQVVDNFDNMELKPELLRGIYAYGFERPSAIQQRAIVPVIK
GHDVIAQAQSGTGKTATFSISILQQLDMNVKGCQALILAPTRELAQQIQKVVIALGDYMN
ITCHACVGGTNVREDMAKLQEGVQIVVGTPGRVYDMINRRALRTDNIKIFCLDEADEMLS
RGFKDQIYEVFQLLPQDTQVVLLSATMPADVLEVTKKFMRDPIRILVKRDELTLEGIKQF
YIAVEKEEWKLDTLCDLYETVTITQAVIFCNTRRKVDWLTEKMHSREFTVSAMHGDMDQK
QREVLMKEFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRK
GVAINFVTTDDVRMLRDIEQFYNTQIDEMPLNVADLI
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgaggaacagttgcaggatgtccaggagggcgagattgagtccaactgggac
caggtcgtcgacaacttcgacaacatggagctgaagcccgagttgcttcgaggtatctac
gcttacggtttcgagcgcccctccgccatccagcagcgcgccattgtccccgtcatcaag
ggccacgatgtcatcgcccaggcgcagtccggcacgggcaagaccgcgaccttctccatc
tccatcctgcagcagctcgacatgaacgtcaagggctgccaggcgctcatcctcgcgccg
acgcgcgagctcgcgcagcagatccagaaggtcgtgatcgcgctcggcgactacatgaac
atcacctgccacgcgtgtgttggcgggacgaacgtgcgcgaggacatggcgaagctccag
gagggcgtgcagatcgtagtcggcacgcccgggcgcgtgtacgacatgatcaaccgccgc
gcgctgcggacggacaacatcaagatcttctgtcttgatgaggcggacgagatgttgtct
cgcggattcaaggaccagatctacgaggtgttccagctgctgccgcaggacacccaggtt
gtgctgctctcggctaccatgcccgctgatgtgttggaggtgacgaagaagttcatgcgc
gaccccattcggattctcgtcaagagggacgagctgactttggaaggtatcaagcagttc
tacattgctgtggagaaggaagagtggaagttggacacgctgtgcgatctgtacgagact
gtcaccattacccaggcggttatcttctgcaacacaaggcgaaaggtcgactggttgacg
gagaagatgcactcgcgcgagttcactgtgtctgccatgcacggcgatatggaccaaaag
cagcgcgaggtcctgatgaaggagttccgctcaggatcatcccgcgtgctcatcacgacg
gacttgcttgcgcgtggcattgacgtacagcaggtgtcgcttgtgatcaactacgacttg
cccaccaaccgagaaaactacatccaccggattggtcgtggtggacggttcggccgtaag
ggtgttgccattaactttgttacgacggatgacgtgaggatgttgagagatatcgaacaa
ttctacaatactcagatcgacgagatgcccctgaacgtcgccgacctcatttag
DBGET
integrated database retrieval system
