Gloeophyllum trabeum: GLOTRDRAFT_56862
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Entry
GLOTRDRAFT_56862 CDS
T03130
Name
(RefSeq) HIT-like protein
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GLOTRDRAFT_56862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gtr03400
]
GLOTRDRAFT_56862
Enzymes [BR:
gtr01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
GLOTRDRAFT_56862
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
GLOTRDRAFT_56862
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
GLOTRDRAFT_56862
DNA repair and recombination proteins [BR:
gtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
GLOTRDRAFT_56862
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
GLOTRDRAFT_56862
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2HE
DcpS_C
HIT
FdsD
Dynein_light
Motif
Other DBs
NCBI-GeneID:
19307143
NCBI-ProteinID:
XP_007863031
JGI:
Glotr1_1_56862
UniProt:
S7QEE2
LinkDB
All DBs
Position
Unknown
AA seq
253 aa
AA seq
DB search
MPNLTILRTYALKSSPTELPSSVLFQHTERSLTIFDAYPKAMFHFLVLPRVTPPFTVAEL
SNLKALFKSGRERAKSLIEMLGQDARQIQKMVEEEMVKRYGSKWDVWLGFHAVPSMEHLH
LHVISSDLVSQALKNKKHYNSFHPKLGFFLHLNDVLSWFESDQSYYDMKTQLKKEEYEPL
LKQDLVCWECDRPMKNIPTLKGHLKEKWEERMKKEKSRFDKKRKRAIDPEEAAGIEQPSS
EPSNKRADTGDTL
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgcctaacctcacgatcctgcgtacatacgctctcaagtccagtcctactgaattacct
tcctccgtactattccagcatacggagaggtcgctgactatcttcgatgcgtatccgaag
gccatgttccattttcttgtccttcctcgagtgactccgccattcacggtggcagagctt
agcaatctgaaggctctcttcaagtccggcagggagcgtgctaagtcactgatagaaatg
cttggccaggatgctcggcaaatacagaaaatggtcgaagaagaaatggtgaaacggtac
ggctccaagtgggacgtctggcttggattccatgccgtgccttccatggaacatctgcat
cttcatgttatttcttcggacttggtgtcgcaagccctgaagaataagaagcattataac
tccttccacccaaagctaggcttctttttgcacttgaacgatgtcttgtcctggttcgag
tccgatcagtcctactatgacatgaagactcaattaaagaaggaggaatatgaacccttg
ctgaaacaggatttggtgtgctgggaatgcgacaggcccatgaagaatatccctacactg
aaaggccatctgaaggagaagtgggaagagcggatgaagaaggagaagagcaggttcgat
aagaagcgcaaacgcgccattgatcctgaagaggcagctgggatagagcagccttcttcg
gaaccttcgaacaaacgcgctgatacgggagacactttgtga
DBGET
integrated database retrieval system