Gloeophyllum trabeum: GLOTRDRAFT_57763
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Entry
GLOTRDRAFT_57763 CDS
T03130
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
gtr
Gloeophyllum trabeum
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gtr03036
]
GLOTRDRAFT_57763
Chromosome and associated proteins [BR:
gtr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
GLOTRDRAFT_57763
microRNA pathway
RISC loading complex
GLOTRDRAFT_57763
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
DEAD
Dicer_dimer
ResIII
Helicase_C
SWI2_SNF2
P_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
19307196
NCBI-ProteinID:
XP_007863123
JGI:
Glotr1_1_57763
UniProt:
S7RYZ7
LinkDB
All DBs
Position
Unknown
AA seq
1727 aa
AA seq
DB search
MQLVNGLPTTMEEVNESLLPRRYQEEIFCRAQEGNVIAALDTGSGKTFISTLLIKWIAAR
DFGQGKVIVFLVPKVALVEQQGNFISKQTPLRVTKCYGAMAIDLSDRGRWKKEFDNSDVL
VMTAQIFLNILTHSHWSMEKVSLLVFDECHHCRKNHAYNGIMREYFQCPSPLRPKIFGMT
ASPIWNPKDAVESLATLERNMDAKVIAVREHVSELLDHSPRPKEIIQPYPPSPEVYESYP
TPTLWNRLQVLNLPDEMEIPWDKIQTRYAVTYHSLGPYGAELYLYSEMKQRLVLLVDQTN
GHEYNGGLDYSGMDVDGLDNAYAIQFEPELRQIGAVLCDYTAFFGEDDSDLTKFRVPFSL
EWCSPKFKVLVDLLVKHYTQTFQGIIFVEQRHVAACLAKVLLRVPYLQGFIKSAELIGHG
ATSVAKSQLKGMALKTQQDVVKSFREKEVNLLIATSVAEEGLDFPACDVVVRFDPIQHMV
GYVQSRGRARHQTSTFVIMVQENHAADLARYRAFVESEPELKRVYQRADPVIQKSTVEED
DEDDGADPADLAERERYVVPSTGAILTYNSAISLLNHLCSLIPRDRFTPVHLPKYSGDFQ
STLELPLSLPLPSDKLTYVGPMKRSKKEAKRAVAFMAVMQLHRLNVFDDYLLPAKSSSGA
DTEDADGRPILDVSDVPETMDVMVRDPFVIHQKMWLHVITLDGKRTAGLVTGTQLPLEVM
MCNGHEIRVHRAMRVIFDDEQRQRELLQTYTKMGIWWCITGRAIQNPLSVFLVPLRETQS
QPDWCAMEHAALFPWGNPDWTIITEEHHGRLMVVNSKDHGRPLLLRRVRRDLTPMSKPPK
GSREGCFPTYRDYVLHLYTRKGIPPEVPEDGPLLEVQPFPRHSSGLYALHSLGQEDDKPV
ANVPNAQFLPQSLCRWIGLSEDIYRTFHVLPKVLHRITDVYRAGRARFELGLPAIGTDLL
VEAYTLPSANTGFSNQRLETLGDSVLKLCTVVHLFNKFPHRHEGQLDILRRNSVSNRTLL
ARAKENGLEHFLTGETQSLRTWRYTLAEGLSSMPEGHVIRSSPRRYPRRSLQDCMEATLG
AGFRMGGIPMALQTGTALGLCLGGPLPWTLRYSRHPLSTPVPPLFTALQDTLGYEFHRSE
LLVEAVTHPSFRSAVSSSYQRLEFLGDALIDLVVMHYLFKKFPEATSGQLSWARSRAVCA
PALASVAVKKLSLHQILLVNNVELSMAISKYVPVLEDTTPEHIVNNGWKHDPPKALSDVL
ESVMGAILVDSAYDYERASVIAEAVMEDVLDVLSPNLPRDPVSELMISTARAGCRKMSYR
KTASNPDSKRNDSISVVVHDVVIVGPVSAANLSLAKGRASEEARSILQDPNSDKYLPKIC
TCAQAMAVDTPEDVDEVDEDHKPLDDETEEGFAMMARKKLVEAESDGPKHEEEEDLSSGD
DSADERMVEEMILNGLARTALPSSCSFLTDRWRGTDAMASLANTAFLNRLKTIYPHAASA
GSKGMQVVSNPWYILTTVGFSGSNRPESVPAVFRHVLDDLAGVHKKENVTHAQAHNEKLL
LARKFRDSLFKSGLTTGYPRAINSMVSLHEAMPEELRDTRPLRNLQTPIEEYMRRGENLF
RSMYGETADPVQKLLDSILPDMGWFSNTIGYGATYGFTEVTTPLETSFILVAALISVDTP
RQINWHLGNARRTGATLEQVKAARQIVMEVAETSGVRWKDGVPEIKE
NT seq
5184 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcgtgaacggattaccgacaacaatggaggaggtcaacgagagcctcctgcct
cggcgatatcaggaggaaatcttctgtcgcgcgcaggagggcaacgttattgcggctttg
gacacgggcagcggtaagacgttcatcagtaccttgctcataaagtggatcgcagccagg
gactttgggcaagggaaggtgatcgtctttctggtcccgaaagtggcgttggtagagcag
caaggaaattttatatcaaagcagactcctctacgtgttacgaaatgctatggcgcaatg
gcgatagacttgtccgaccgagggcggtggaagaaagagtttgacaattcggacgtgctg
gtaatgaccgctcagattttcctcaacatcctcacgcactcacactggagcatggagaaa
gtttctctcttggtctttgacgaatgtcatcattgtcgcaaaaaccacgcgtacaacgga
attatgcgggagtacttccagtgccccagtcctctcagacccaagattttcggaatgaca
gcttcccctatctggaaccccaaggacgccgtagagtcgctcgccacgctcgagagaaac
atggacgcgaaagtgatcgccgttcgcgaacatgtcagcgagttgttggaccactccccg
cgtccaaaagagatcatccaaccctatcctccctcccctgaagtttacgaatcatatcct
actcctaccttgtggaatcgccttcaggtcttgaacttacccgatgagatggaaatccca
tgggataagattcagactaggtacgcggtcacataccacagcttgggtccgtacggggcc
gagctatacttgtactcggagatgaagcaacgcctcgtcctactcgtggatcaaacgaac
ggacatgaatacaacgggggtctagactactccggcatggacgtcgacggcttggacaac
gcgtacgcaatccagtttgagcccgagctccgtcaaatcggcgccgtcctctgcgattac
accgcatttttcggagaggacgattctgatttgacgaagttccgtgtacctttcagcctg
gagtggtgttcgcccaagtttaaggtcctcgtcgacctcctcgtaaagcactatacccag
accttccagggcatcatctttgttgagcagcgtcatgtagcagcctgcttggcaaaggtc
ctgcttcgagtcccctatctccaaggcttcattaagagtgctgagctcataggacatggt
gcaacgagcgtggccaagtcgcagctgaagggcatggcgctgaagacccaacaagatgtt
gtgaaatcgtttcgagaaaaggaagtgaacctactcatcgccacgtctgtcgctgaagag
ggcttggatttcccggcttgcgatgtcgtcgttcggttcgatcctatacagcatatggtt
ggctacgtgcagtcccgtggtcgggcccgccatcaaacctcgacgttcgtcatcatggtc
caagagaatcacgccgccgacttggctcggtaccgcgcgttcgtcgagagcgagcccgag
ttaaagcgtgtctaccagcgtgccgatcccgttatacagaagtcaacggttgaggaggat
gatgaagacgacggtgcagacccagctgatctcgcggagagagaacgatacgtcgtaccg
tcgacgggtgccatcctgacttacaattctgctataagtcttctcaatcatctctgctcc
ttaatcccgcgcgatcgttttacgcccgttcacctgccgaagtactcgggcgacttccag
tccactttggagcttccgctttctttgccattgccgtccgacaagctgacgtacgttggc
cctatgaaacgatcgaaaaaggaggcgaagcgcgcggtagctttcatggcagtcatgcaa
ttacaccgcttgaatgtgttcgacgactaccttcttcccgcgaagagttctagcggtgct
gataccgaagatgctgatggacgccccatcctggacgtcagtgatgttccggagactatg
gacgtgatggtgcgcgatcctttcgttatccaccagaagatgtggttgcacgttatcact
ctggatggcaagcggactgcgggcctggtgacagggacgcagctgccgctggaggtcatg
atgtgcaatggccacgagatccgtgtacacagggcgatgcgggtgatattcgatgatgaa
caacgacagcgggagttgctgcagacctatacgaagatggggatatggtggtgtattacg
ggacgagctatccaaaatccgctttcggtcttcttagtacctctcagggagacgcagagt
caacctgattggtgcgccatggagcacgccgcactctttccgtggggaaaccctgactgg
accattatcaccgaagaacaccacggtcgattgatggtcgtgaacagcaaggaccacgga
cgcccacttctgttgaggcgtgtgcgtcgtgatttgacgcctatgtcaaagccccccaaa
ggctccagggaaggctgctttccaacttaccgagattatgtacttcatctatacactagg
aaaggcattccgcctgaggttcctgaagacggacctctgctcgaagtgcagcccttcccc
aggcactcgtctggcctttacgcgcttcattctctaggtcaagaagacgacaagccggta
gccaatgtcccgaacgctcaattcctgccacaaagtctatgtcgatggatcggcctatct
gaagacatctacaggaccttccacgtcctgccgaaagtactccacagaatcaccgacgtc
taccgcgctgggagggcgcgtttcgagctaggtttgcctgccataggaaccgatttgctc
gtggaagcctataccctcccaagtgccaacacgggcttcagcaatcaaaggctggagact
ctgggtgattccgtactgaagctttgtacggtggtccatctgttcaataagttccctcac
cggcatgaaggccaacttgatatactacgaaggaactcggtctcgaatcggactctgctt
gctcgcgcgaaagagaacgggctcgagcatttcttgacgggcgagacgcaaagcttgagg
acatggaggtacacgctcgctgaaggtttaagttctatgccagaaggacatgttatacga
agttcgccgcgaagatatcccaggaggagcttgcaagattgcatggaggcgacgttaggc
gcgggtttcagaatgggaggaataccgatggctctccagacaggtactgctctgggactc
tgcctcggtggacctctaccgtggactctgcgatacagccgccacccgctgtcgacaccc
gtaccgcccctgtttacagccttacaagatacgctgggttatgagttccatcgtagcgag
ttgttggttgaagctgttacccacccgtccttccgatcggctgtcagttcttcgtatcaa
cgcctagagttcctcggagacgccttgatcgacctggtcgtcatgcattatctcttcaag
aagttccctgaggctacgtcgggccaactgtcttgggcgcgttctcgtgccgtgtgcgcc
ccagctctagcctccgttgctgtcaagaagctatccttgcatcagatacttctggtcaac
aatgtggagctgagcatggctatcagcaagtatgtgcccgtactggaggatacgacgccg
gagcacattgtgaacaatggttggaagcacgacccgcccaaggcgctgagcgatgtcttg
gagagcgtcatgggggccattctggtcgattcagcgtatgattatgaaagagcgtcggtg
atcgcggaagcggtgatggaggatgttctagatgtcttgtcgcctaacttacctagggac
cctgtctcggagctcatgatcagtactgcccgagcaggctgtcggaagatgtcgtatcgc
aaaacggcgagcaatccggactcgaaacgcaacgatagtatctcggttgtcgtccacgat
gtagtcatcgttgggccagtatccgccgcgaacctgtcgttggcgaagggcagagcctca
gaagaggcgcgttccatcttacaggatccgaactccgacaagtatctccccaagatatgt
acctgcgcgcaggctatggcagtcgatacgccagaggatgtggacgaagtcgatgaggat
cacaagcctttggacgacgagaccgaagaagggttcgcgatgatggccaggaagaagctg
gtggaagccgaaagtgatggaccgaagcacgaggaagaggaggatttgtcttctggagat
gattccgctgatgaacgtatggtagaagaaatgatcttgaatggactagcgcgaacggcc
ttaccaagttcttgttccttcctcacagatcggtggagaggaacggacgcaatggccagc
ctggctaatactgcattcctgaatcgtttgaagacgatataccctcacgctgcctccgct
gggagcaaaggcatgcaagtcgtctccaacccatggtatatccttaccacagttgggttt
agcggcagcaacagacctgagtcagtcccagctgtcttccgacacgtactggatgatttg
gcaggcgtccacaagaaagaaaatgtgacccatgcccaagcacataatgagaagctgcta
cttgcacggaagtttcgagattcactcttcaaatctggactcacgacaggctatccacga
gccatcaatagcatggtttcgttacatgaagctatgccggaggaactccgcgatacacga
cccttacggaatctccagactcccatcgaggagtatatgagaagaggggaaaatctcttc
cgttcaatgtacggggagacagccgaccccgtacagaaactactggacagtatcctgcct
gacatgggctggttctcaaatacaataggctacggagccacctacgggttcacggaagtt
acaacacctctcgagacatccttcatcctcgtcgccgcactgatatcggtggacacgcca
cgccaaataaattggcacctcggaaatgcacgtcgaaccggagcgacgctagagcaggtc
aaagctgccagacagattgtgatggaagtggcagagacatctggtgtccgctggaaggac
ggagttcctgagattaaggagtga
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integrated database retrieval system
