KEGG   Gloeophyllum trabeum: GLOTRDRAFT_57794
Entry
GLOTRDRAFT_57794  CDS       T03130                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K15542  polyadenylation factor subunit 2
Organism
gtr  Gloeophyllum trabeum
Pathway
gtr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:gtr00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    GLOTRDRAFT_57794
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gtr03019]
    GLOTRDRAFT_57794
Messenger RNA biogenesis [BR:gtr03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     GLOTRDRAFT_57794
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz Beta-prop_IFT122_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st WDR55 Beta-prop_EML Beta-prop_Aladin WD40_MABP1-WDR62_2nd EIF3I Beta-prop_IFT140_1st ANAPC4_WD40 DSE1_N Beta-prop_WDR19_1st ASA1 Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_WDR75_1st CFAP251_N Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_WDR41 Beta-prop_SCAP Beta-prop_NOL10_N WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_WDR35_TULP_N PROPPIN eIF2A Beta-prop_HPS5 NBCH_WD40 PAC11 WD40_RFWD3 Beta-prop_DCAF4 Tricorn_2nd Ge1_WD40 PEP5_VPS11_N Beta-prop_RIG_1st Beta-prop_NUP159_NUP214 Nucleoporin_N WD_LRWD1 TRM82_WD Beta-prop_WDR11_2nd Beta-prop_SPT8 B-prop_COPA_B_2nd WDR54 Beta-prop_ELP1_1st DNAI3_WD Det1 Beta-prop_ACSF4
Other DBs
NCBI-GeneID: 19307198
NCBI-ProteinID: XP_007863150
JGI: Glotr1_1_57794
UniProt: S7RZ12
LinkDB
Position
Unknown
AA seq 352 aa
MGRWALMRKLRPNPTYVPQVRPALPYIIDLLPPKAYPDNASTSLCTKFVHTSTNKIRCPV
NVVVWTPEARRVLTGSTSGEFTLWNGLTFNFETILQAHDSAVRAMTFTHAGAFLASTDQS
GVIKYFQPNMNNLAAWQGHREAIRGLSFSPDDRRFATASDDSTIRIWAFEESREERVLTG
HGWDVRCVEWHPTKGLLVSGSKDNQIKFWDPRTGTALATLHQHKNTIQALAWSPNGNLVA
SASRDQTVRVFDIRAMKEFKVLKGHKKEVCSVTWHPIHPILVTGGSEGAILHWDLTTPTP
TIPAASPQARAALPQAHDSNVWALAFHPLGHLLVSASNDHTTRFWARERPGE
NT seq 1056 nt   +upstreamnt  +downstreamnt
atggggcgctgggcgttgatgcggaagctgaggccgaacccgacgtatgtgccgcaggtg
aggccggcgctgccgtatatcatcgacttattgccgccgaaggcgtatcctgacaatgcc
tcgacgtccctatgtacaaagttcgtgcacacgtccacgaataagatccggtgcccggtg
aacgtcgtcgtgtggacgcccgaggcgcggcgcgtgctcaccggctcgacgtcgggcgag
ttcacgctctggaacgggctcacgttcaacttcgagacgatcctgcaggcgcacgacagc
gcggtgcgcgcgatgacgttcacgcacgcgggcgcgttcctcgcgagcacggaccagagc
ggcgtgatcaagtacttccagccgaacatgaacaacctcgccgcgtggcaggggcaccgc
gaggcgattcggggcctgagttttagtccggatgatagacggttcgcgactgcgagcgat
gattcgacgattaggatttgggcgtttgaggagagtcgggaggagagggtgttgacggga
catgggtgggatgtgaggtgcgtggagtggcatccgacgaaggggctgcttgtctctggg
agcaaggacaaccagatcaagttctgggatccacggacggggaccgcgctggctaccctg
caccaacacaaaaacacgatccaggcactcgcgtggtctccgaacggcaacctcgtcgcg
agcgcgtcgcgcgaccagaccgtgcgcgtgttcgacatccgcgcgatgaaagagttcaaa
gtgctcaaggggcacaaaaaggaagtctgctcggtaacctggcacccgatccacccgatc
ctggtcaccggcggctcggagggcgcgatcctgcactgggacctcacgacacccacgccg
acgatcccggcggcctcgccccaggcgcgcgcggcgctcccgcaggcgcacgacagcaac
gtgtgggcgctcgcgttccacccgctgggccacctgctcgtgagcgcgtcgaacgaccac
acgacgcgcttctgggcgcgcgagcggccgggcgag

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