Gloeophyllum trabeum: GLOTRDRAFT_58441
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Entry
GLOTRDRAFT_58441 CDS
T03130
Name
(RefSeq) DEAD-domain-containing protein
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
gtr
Gloeophyllum trabeum
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gtr03009
]
GLOTRDRAFT_58441
Enzymes [BR:
gtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GLOTRDRAFT_58441
Ribosome biogenesis [BR:
gtr03009
]
Eukaryotic type
Pre-60S particles
Helicases
GLOTRDRAFT_58441
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
Motif
Other DBs
NCBI-GeneID:
19307235
NCBI-ProteinID:
XP_007864360
JGI:
Glotr1_1_58441
UniProt:
S7RVF2
LinkDB
All DBs
Position
Unknown
AA seq
948 aa
AA seq
DB search
MPKASAAKRKRDHESDVSDWDISSGSNADSDGEIDISSALVGKKPKLAAPKQDEEGVPED
EDDDEHLQDIIRESIAKRDTKGGTEVLKKVKGKNKMVKGEVGGGSFQSMGLHPWLLRSLT
LQGYRTPTPIQRLAIPALLSNPPRDLVGMARTGSGKSLAYMVPLVQRLGGRHSTAFGARA
LILLPARELALQVLKVGKELARGWHAGEGDHAGEKNTDDGKKGQGLRWGLVVGGEGMDEQ
FEMITNNPDVIIATPGRLLHLIVEMNLDLKSVQYVVFDEADRLFEMGFETALTEILHRLP
TTRQTLLFSATLPKSLVEFAKAGLQNPKLVRLDAETKISTDLRMAFFSVKQAEKDASLFF
LLRNVIGVPLGSSKREEESPDKKGKGKAKYDHVTGPHQTLIFAATKHHVEYLTQLLSTAG
YSVSQIYGSLDQTARTHQMDQFRRGLTNILVVTDVAARGIDIPVLENVVNYDFPQGARVF
VHRVGRTARAGRSGWAWSFVTNTELPYLLDLQLFLTRPIKKELPPGSGDEAYTESLVLGT
FDRTKLDEEVEFVRSLDEENHNLPALREVMRKGHKMYERSKGKASQASYKRAKEMIKDGT
KWGLAGSEAGIHPVLFRGKENEQQSRDQDQARKALLQKVNSFRPTETVFEIGSRGKTESA
QLMKERRKALEKAASRAVVPITPVDSRDSDADEPEAGSSGKDVVMADEEEIAAVFEVSSK
KKGKEKASSFRDEEFYMSHYQTGAETEKGYSLRDGASFVEQARNATFDLTNDEGLAAQKR
MQLTWDKKKKKFIKGAGEGADNVKLVKTESGVRLPATYRSGRFDEWKAKSKVHLPRVGEA
ELETARNKGNFGGRRFKHNKVTAAKPLDKLSKDYERKTRQLNKKGAGEEDGPSPKGGKKG
FAASKRYGGQTAGHVKNELKNAAQIRKERKLYEQRKAKNARPSRRKGR
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagcctccgccgcaaaacgcaagcgcgaccatgaatcggacgtctctgactgg
gatatatcctcggggtctaatgctgactcggacggcgaaatcgacatttcgtctgcactg
gtcggaaagaaacccaaacttgcggccccgaagcaggatgaagagggtgtaccagaagac
gaggatgatgatgagcacctgcaggatattattcgggaatctatagcgaagcgcgacacc
aaggggggcacggaagtgctgaagaaggtgaagggcaagaataagatggtcaaaggcgaa
gtcgggggagggagtttccagagcatggggttacatccttggctattgaggtctctgacg
ctacaagggtaccgcactccaacacccattcagcgactggcgatcccggccctgttgtcc
aacccgcctcgtgatctagtaggtatggctcgtacaggctctgggaagtcattagcgtat
atggtacctctcgttcaacggctcggtggtcgtcactcgacagcgtttggcgcgcgcgct
ctgattctcttgcctgctcgagagttggcgttgcaagttctcaaagtgggaaaggagttg
gctagagggtggcatgctggagaaggtgatcacgctggagagaagaataccgacgatggc
aagaagggccagggtctgcgatggggcctagtagtaggcggtgaagggatggacgagcag
ttcgaaatgatcacgaataaccctgacgtaattattgctactcccggtcgactgctgcat
ctcattgtcgagatgaacttggacctcaaatctgtgcaatatgtggtgtttgacgaagcc
gatcgtctattcgagatgggctttgaaaccgctctgaccgagattctgcatcgtctgcca
acaacgaggcaaactcttcttttttccgcgactctcccaaagtcactagtggagttcgcc
aaggccggtctacagaatcccaagcttgtccgcttggacgcggaaacgaagatcagcacc
gatcttcgcatggccttcttctccgtcaagcaagccgaaaaggacgccagtctgtttttc
cttctgcggaatgtcatcggtgtccccctcgggagctccaagagggaagaggaatccccc
gataagaagggcaaaggaaaagccaagtatgaccatgtaacaggcccgcatcaaaccctc
atattcgcggcgacgaagcaccatgtcgaatacctgacacagctgttgtcaactgccggg
tactccgtctcgcagatctacggctcattggatcagaccgcccgtacgcatcaaatggat
caattccggcggggactgacaaacatcctggtcgtcaccgatgttgctgcaagaggtatc
gatatccctgtcctggagaatgtcgtgaactacgatttcccgcagggggcacgagtgttt
gtccaccgtgtaggacggactgctcgagcaggtcgcagcggctgggcgtggtcattcgtc
acgaacaccgaactaccttatctcttggatctgcaactcttcctgacacgccccatcaag
aaggaacttcccccaggttccggagacgaagcttacacagagtcgctcgtgctcggcaca
tttgacaggaccaagctggacgaggaagtggagtttgtgcggtccctggacgaggagaac
cacaatttacccgccctccgagaggtcatgcggaaaggccacaagatgtatgagcgaagc
aagggcaaggcgagccaagcgagctacaagcgggcgaaggagatgatcaaggacgggacg
aagtgggggttggcgggctccgaggccggtatccatcctgtgctcttcagaggcaaggag
aacgagcagcagagccgggaccaggatcaggccaggaaggcattgttgcaaaaggtcaat
tcgtttcggcctacggagacggtgttcgagatcgggtcgcgagggaagacggagagtgcg
cagcttatgaaggaaaggcggaaagcgttggagaaggctgccagtcgcgccgttgtgcct
attactccggttgactcgagggactctgatgctgacgagccggaggcgggatctagtggc
aaagatgtggtcatggccgacgaggaagaaatagctgctgttttcgaagtttcaagtaag
aagaaagggaaggagaaagcatctagtttccgagacgaggaattctacatgtcgcattac
cagaccggtgccgagacggagaaaggctactccctacgagacggcgcgtccttcgtcgag
caagcgcgcaacgccacgttcgacctcaccaacgacgaaggtctcgccgcgcagaagcgc
atgcagctcacgtgggacaagaagaaaaagaagttcatcaaaggcgcaggcgagggcgcg
gacaatgtgaagctcgtaaagaccgagagcggcgtgcgcctgccggctacgtaccgtagc
gggcgcttcgacgagtggaaggcgaagagcaaggtgcacctgccccgggtgggtgaggct
gagcttgagactgcgaggaataagggtaatttcggggggaggcggttcaagcataataag
gtgactgctgcgaagccgctggataagctcagcaaggattacgagcggaagacacggcag
ctgaataagaaaggcgcgggagaggaggatggaccctcaccgaagggagggaagaaaggg
tttgcagcgagcaaaagatacggcggccagacggcggggcacgtcaagaacgagctcaag
aacgccgcgcagatccggaaggagcgcaagctgtacgagcagaggaaggccaagaacgcg
agacccagtcggcggaaggggagg
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