Gloeophyllum trabeum: GLOTRDRAFT_59416
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Entry
GLOTRDRAFT_59416 CDS
T03130
Name
(RefSeq) ubiquitin-domain-containing protein
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03010
Ribosome
gtr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
GLOTRDRAFT_59416
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
GLOTRDRAFT_59416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
gtr03011
]
GLOTRDRAFT_59416
04121 Ubiquitin system [BR:
gtr04121
]
GLOTRDRAFT_59416
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gtr04147
]
GLOTRDRAFT_59416
Ribosome [BR:
gtr03011
]
Ribosomal proteins
Eukaryotes
Small subunit
GLOTRDRAFT_59416
Archaea
GLOTRDRAFT_59416
Ubiquitin system [BR:
gtr04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
GLOTRDRAFT_59416
Exosome [BR:
gtr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GLOTRDRAFT_59416
Exosomal proteins of colorectal cancer cells
GLOTRDRAFT_59416
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
DUF2604
TBK1_ULD
IBR
Ubiquitin_5
UBL_UBAC1
Plexin_RBD
Motif
Other DBs
NCBI-GeneID:
19307292
NCBI-ProteinID:
XP_007865027
JGI:
Glotr1_1_59416
UniProt:
S7RT35
LinkDB
All DBs
Position
Unknown
AA seq
159 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKTYNTPKKIKHKRKKVKMAILKYYKVDSDGKIKRLRRE
CPAAECGAGIFMAFHKDRQYCGKCGLTYTFQPGTKPPAV
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgttaaaaccctcacgggtaaaaccatcactctcgaggtcgaatcctca
gacaccatcgacaatgtcaaggccaagatccaggataaggagggcattcctccggaccag
cagcgtctgattttcgccggcaagcagctcgaggacggtcgcaccctcagcgactacaac
atccaaaaggagtccaccctgcacttggtcctccgcctgcgcggtggtgccaagaagcgc
aagaagaagacctacaacacccccaagaagatcaagcataagcgcaagaaggtcaagatg
gctatcctgaagtactacaaggtagactccgatggcaagattaagcgtctccgtcgcgag
tgtcccgctgccgagtgcggtgctggtatcttcatggctttccacaaggaccgtcagtac
tgcggcaagtgcggtttgacttacaccttccagcctggcaccaagccccccgcggtgtaa
DBGET
integrated database retrieval system
