KEGG   Gloeophyllum trabeum: GLOTRDRAFT_59842
Entry
GLOTRDRAFT_59842  CDS       T03130                                 
Name
(RefSeq) hypothetical protein
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
gtr  Gloeophyllum trabeum
Pathway
gtr03020  RNA polymerase
gtr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    GLOTRDRAFT_59842
  09124 Replication and repair
   03420 Nucleotide excision repair
    GLOTRDRAFT_59842
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gtr03021]
    GLOTRDRAFT_59842
   03400 DNA repair and recombination proteins [BR:gtr03400]
    GLOTRDRAFT_59842
Transcription machinery [BR:gtr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     GLOTRDRAFT_59842
DNA repair and recombination proteins [BR:gtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      GLOTRDRAFT_59842
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 19307323
NCBI-ProteinID: XP_007865247
JGI: Glotr1_1_59842
UniProt: S7QB43
LinkDB
Position
Unknown
AA seq 134 aa
MTTRLRHRPQAEDEDASVLKLGPAFNNAGCLLISEVKYLLENRDKDAPDTAVYNKTLEYV
KTFAKFNTTEAASAVRETLRREPLLTQFETAQIANLCPADAEEAKSIIPSLVKIDDDRLN
ALLAEIQTMRRFQS
NT seq 405 nt   +upstreamnt  +downstreamnt
atgacgacccgactcagacatcgacctcaggcggaagacgaggacgcgtccgttctgaag
ctagggccagcattcaacaacgcgggttgtcttctcatctccgaagtcaagtacctcctc
gagaatcgcgacaaggacgcgccagataccgctgtctacaacaaaaccctcgaatacgtc
aagacctttgcgaaattcaacacgaccgaagctgcgagcgccgtccgagaaacgctccgt
cgagaacccctcctcacccagttcgaaaccgcgcagatcgcgaacctctgccccgcagac
gccgaagaggccaaaagcatcatccccagcctcgtcaagatcgacgacgaccggctcaac
gcgctcctcgccgagatccagacgatgcgccgcttccagtcgtag

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