Gloeophyllum trabeum: GLOTRDRAFT_60168
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Entry
GLOTRDRAFT_60168 CDS
T03130
Name
(RefSeq) RNA-binding domain-containing protein
KO
K12876
RNA-binding protein 8A
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03013
Nucleocytoplasmic transport
gtr03015
mRNA surveillance pathway
gtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GLOTRDRAFT_60168
09122 Translation
03013 Nucleocytoplasmic transport
GLOTRDRAFT_60168
03015 mRNA surveillance pathway
GLOTRDRAFT_60168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtr03019
]
GLOTRDRAFT_60168
03041 Spliceosome [BR:
gtr03041
]
GLOTRDRAFT_60168
Messenger RNA biogenesis [BR:
gtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
GLOTRDRAFT_60168
Spliceosome [BR:
gtr03041
]
Complex C
Other components
EJC/TREX
GLOTRDRAFT_60168
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
19307344
NCBI-ProteinID:
XP_007865415
JGI:
Glotr1_1_60168
UniProt:
S7RU83
LinkDB
All DBs
Position
Unknown
AA seq
168 aa
AA seq
DB search
MSDDGMNIDDVGEGGGVVRRKGRGFQNAAGGGNETTAGPEPTYDRVESAKDSETRAARSV
EGWIVLVTGVHEEATEEDVMDKFAEYGEIKNLHLNLDRRTGYVKGYALVEYETMAEAQAA
IDGASGTTLLEQTVQCDYAFVRPPPSGPKGGRGRRGRSASPSRRRNRE
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgatggcatgaacattgacgacgtcggtgagggcggtggtgttgtcaggcgg
aaaggcagaggtttccaaaacgcggctggcggcgggaatgaaacgacggcggggcctgaa
cctacgtacgaccgcgttgaatctgccaaagactcggagacgagggcagcgcgatcggtg
gagggatggatcgttctcgttactggcgtacatgaggaagctacggaggaagacgtgatg
gacaagttcgcagagtacggcgagataaaaaaccttcacttgaacttggacaggcggacg
ggctatgttaagggctatgctttggtggaatacgaaacgatggccgaagctcaagctgcc
atagacggtgcttccggcacgactctgctggagcagaccgttcaatgcgattatgcgttt
gtgcggccaccaccgtcaggaccgaagggtggtaggggccgacgaggtcgtagcgctagc
ccttctcgccggaggaatagggagtaa
DBGET
integrated database retrieval system
