Gloeophyllum trabeum: GLOTRDRAFT_62488
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Entry
GLOTRDRAFT_62488 CDS
T03130
Name
(RefSeq) NTF2-like protein
KO
K14284
nuclear RNA export factor
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03008
Ribosome biogenesis in eukaryotes
gtr03013
Nucleocytoplasmic transport
gtr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GLOTRDRAFT_62488
03015 mRNA surveillance pathway
GLOTRDRAFT_62488
03008 Ribosome biogenesis in eukaryotes
GLOTRDRAFT_62488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtr03019
]
GLOTRDRAFT_62488
03009 Ribosome biogenesis [BR:
gtr03009
]
GLOTRDRAFT_62488
Messenger RNA biogenesis [BR:
gtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
GLOTRDRAFT_62488
mRNA cycle factors
Stress granule specific factors
GLOTRDRAFT_62488
Ribosome biogenesis [BR:
gtr03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
GLOTRDRAFT_62488
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NXF_NTF2
TAP_C
LRR_NXF1-5
LRR_4
LRR_9
UBA_4
UBA_8
Motif
Other DBs
NCBI-GeneID:
19307483
NCBI-ProteinID:
XP_007867374
JGI:
Glotr1_1_62488
UniProt:
S7RMV6
LinkDB
All DBs
Position
Unknown
AA seq
500 aa
AA seq
DB search
MRRNAVSSVTGSPKPTLEPRTPTVAKKALDVWRDFVKSRYNADAQFLNLERMLDDDLIRK
HHLLPPGAPGSSLRESSVIFKLASQLKPEVKTISLANNNISSGQLLSSLSHYLPKLANLS
LENNNLQTWRDLDFISTRKGRLEHLQELILTGNPVRELEYKNGRGDKYKGEIGRRFPSLT
VLDREPMTVIAFDAPQASSSTHAARPTATTFPCDMGTSFITGVDPALVSGFLARFFSVWD
TQRASLMDAYHPSATFSFSVNTSIPTRARLQGFQHSKEMPHQKKLEWTPWITGGDGGSRN
LSRMAGGLDKMVRSLHVGAEAAVRAMVALPATKHDVGGAPEKFCVDAWPVGESLLLVTVH
GQFTEEPIGGERSFDRSFVLAISPDGSRAKLNGWDVMVMSDQLVIRVYSSHEAWRAGPMR
VQHGDSIQPSPSQQSIPPQLQEQLAPIPEPERTLVLQICQRTGLNVKFAVDCLQGNGWDF
ERAVRNFEEVKGNLSRDAFL
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagaaatgcagtctcttctgttacaggctccccgaaaccgacgctcgaaccccgc
acgccgaccgtcgcgaagaaggcgctcgacgtttggagggacttcgtgaagagccgatat
aatgcagatgcgcagtttctcaatcttgagcgaatgctggacgacgacttgatccgcaag
caccatcttctaccaccaggagcaccgggatcgtcattacgagaatcatcagtcatcttc
aagctcgcatcccagctcaagcctgaagtaaagacaatatcgctcgccaacaacaacatt
tcatctggacaactcctctcctcactttcccattatctcccgaaactcgccaacctatca
ctagagaacaacaacctacaaacatggcgagatctcgacttcatctctacgcgcaaaggc
agactcgagcatctgcaagagttgatcctgaccggaaaccccgtacgagagttggagtat
aagaacggacgcggagacaagtacaaaggtgaaattggacgccgcttcccctcgttgaca
gtactggatcgggagccgatgacggtcattgcgttcgatgcgccacaagcgtcatcgtcg
acgcacgccgcaaggccgacggcgacgactttcccttgtgatatgggaacatctttcatc
acgggtgtagatcctgcccttgtcagcggtttccttgcacgcttcttctctgtgtgggac
acccaacgcgcgtcgctaatggacgcctatcacccctctgcgaccttctccttctccgtg
aacacgtccatcccgacgcgcgcgcgcctgcagggcttccagcactcgaaagagatgccg
caccagaagaagctcgagtggacgccgtggatcaccggcggggacggcggctcgcggaac
ctgagccgcatggcgggcggccttgacaagatggtgcgcagcctgcacgtaggcgccgag
gcggcggtgcgcgcgatggtggcgctgccagcgaccaagcacgatgtgggtggggcgccg
gagaagttctgcgtggatgcgtggccggtgggcgagagtttgctgttggtgactgtgcat
gggcagtttacggaggaaccgattggaggcgagcggagcttcgaccggtcgtttgtgctc
gccatctcgccggacggatcgagagcgaagctgaatgggtgggatgtcatggtcatgtcc
gaccagctcgtcatcagggtctattccagccacgaggcgtggcgggcagggccgatgcgc
gtccagcacggcgactccatccaaccatccccgtcgcagcaatccataccgcctcaactg
caagagcagcttgcgccgatcccggaaccggaacgtacgctggtattgcaaatatgtcag
cggacggggttgaacgtcaagtttgcggtggattgcttgcagggaaatgggtgggatttc
gagcgggcggttaggaactttgaggaggttaaggggaatctatcccgggacgcctttctg
taa
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