Gloeophyllum trabeum: GLOTRDRAFT_63420
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Entry
GLOTRDRAFT_63420 CDS
T03130
Name
(RefSeq) Sec63-domain-containing protein
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GLOTRDRAFT_63420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gtr03041
]
GLOTRDRAFT_63420
Enzymes [BR:
gtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
GLOTRDRAFT_63420
Spliceosome [BR:
gtr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
GLOTRDRAFT_63420
Complex C
U5 SnRNP specific factors
GLOTRDRAFT_63420
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_PWI
ResIII
BRR2_plug
Helicase_C
PhoH
AAA_25
T2SSE
Motif
Other DBs
NCBI-GeneID:
19307549
NCBI-ProteinID:
XP_007868040
JGI:
Glotr1_1_63420
UniProt:
S7Q1B9
LinkDB
All DBs
Position
Unknown
AA seq
2119 aa
AA seq
DB search
MGSRVQREAPKDVEKKKKRAAERQEATEKQLSKRKAEAAGFGYADIIEATQDVEGLTYRP
RTAETREVYELILSSVHQALGDQAQDVVRSAADTVLETLKNDSLKDFDKKKEVEDVLGPI
ANESFSQLVNLSKKITDYGAEDEKIVDPDLERKEGEIDEDVGVAVVFDEEEQEDEEEEGY
EVREETDDEDEEMGEDQEDQAPEETLEGEELVVGGESSARTTAKAKADKDIVSPHQVDAF
WVQRQVSEVYPDPVTAADKASSVLSILGSESSLRDCENQLMELFEYQSFPLITKFLKNRD
VIVWCTKLQRSDADERVNVEVAMREKGVGWILRELAGDRQAKARDADAMDVDQDAKKVDV
PKTGTLAPGSTVQPKRVVDLESMAFSQGGHLMSNKKCKLPEGSFKRARKGFEEIHVPAPK
KKTSDAATVPISDLPAWAREAFPGYKHLNPVQSKLYPTAFGTDEPILLCAPTGAGKTNVA
VLTILNEMSKWRDEATGQFDLDSWKVIYVAPMKALVQEQVGQFSKRLAPYGIKVGELTGD
AQMTKQQISETQIIVTTPEKYDVITRKSSDTSYTNLVRLIIIDEIHLLHDERGPVLESIV
ARTIRRMEQTGEYVRLVGLSATLPNYQDVATFLRVDESKGLFYFDASSRPCPLQQQFVGV
TEKKAIKRYQVMNEVCYEKVLDQAGKNQVLVFVHSRKETAKTAKFIRDMAIEKETITQFV
KPDSAVREILNEEAGNVKDGNLKDLLPFGFAIHHAGMTREDRGLVEELFADGSIQVLVCT
ATLAWGVNLPAHCVVIKGTQIYNPEKGRWVELSPQDVLQMLGRAGRPQYDTFGEGVIITN
HSELQYYLSLMNQQLPIESQFVAKLADNLNAEIVLGTIRNRDEAVQWLGYTYLYVRMLKS
PSLYSVGVDYEDDQGLVQKRADIIHSAAAMLEKCHLIKYERASGRFQSTELGRIASHYYV
TYNSMATYNKHLRPSMQMLELFRVFALSNEFKYIPVRQEEKLELGKLLERVPIPVKESVD
EPAAKINVLLQAYISQLKLEGFALVADMVFVQQSAGRILRAMFEICLKRGWAVPARAALD
MCKMVERRMWGSMTPLRQFKRVPPEIIRKAEGKQFPWYRYFDLNPPEIGELLGIPKAGQL
VHRLVHSFPKLQLQAQVQPITRSLLRIDLSIIPDFRWDENIHGSAETFWIIVEDVDGEII
LFHDTFLLRQKYAEDEHNVTITVPMFEPVPPNYYISVISDRWLHAETRLPISFKHLILPE
KFPPPTPLLDLQPLPLSALHNKEFESIYASTIQTFNKIQTQVFQALYTSDENVFVGAPTG
SGKTICAEFALLRLWSKREQPRAVCIEPFQEMVDQRVAEWRSKFGNLQGGKEIVSLTGET
AADLRLLEKGDVIVCTPTQWDVISRRWRQRKNVQTIGLLIADEVQLVGGEIGPTYEVVIS
RTRYVSAQTDIKTRIVACGVSLANARDLGEWIGAPSHAIFNFPPSARPLDMDIHLQSFNI
PHFPSLMIAMAKPAYLSVMEYSPNKPVIIFVPSRRQCRLTADDILTHCGADQDENRFLHV
EEADLQPHLDHVSDQGLVETLKHGIGYYHEALSKQDKRIVERLFQSGAIQVLIASKDTAW
ALPVASYMVIIMGVQYYEGKEHRYVDYPVMDVLQMMGRACRPLEDDRSRCVLMCQQTRKD
FYKKFLAEGLPIESHLPTHLLHDYFLAEIAVKTIENKQDAMDILTWTYFYRRMTQNPNYY
NLHNVSHQALSDHLSELVENTLNDLVNSKCITIEDEMDVSALNLGMIAAYYNISYVTVEV
YTLSLKERTKLKGILEVVSSSAEFETIPIRKHEDVLLRRIYDRVPVKLDRADFEAPHFKT
FLLLQAHFSRLQLPPDLAADQVLVLEKVLNLLSACVDVLSSNAWLNALRAMDLSQMCVQA
MWETDSPLKQIPHFEPDVIARCKEAGVESVYDIMEMEDDKRNAVLQMDARQMRDVATFVN
SYPTLDVNHELVKGEYTAGAPITLKVALSKDADEEEDSNDDQTVVAPYYPLKKMANWWLV
VGDPKSQQLLSIKKVTVTKSLAVKLELTLPEGKHSLHLYVICDSYVGADHDIPLETIEVA
EGEESDSDEDMESGDEMEE
NT seq
6360 nt
NT seq
+upstream
nt +downstream
nt
atgggttctcgggttcagagggaggctccgaaggacgtagaaaagaagaagaagagggcc
gcggagcgacaggaggctacggagaagcagctaagcaagcggaaagctgaagctgctggc
tttggctatgcggacattatcgaggcgacacaggatgtggaagggctcacataccgccca
cggacagcagagacgcgagaagtttacgaacttattctttcttctgtgcatcaagctctt
ggagaccaggcgcaggacgttgtacgtagcgctgctgacacagtgctcgagacgttgaaa
aatgacagcctcaaagacttcgacaagaagaaggaggttgaggatgtgcttgggccgatt
gcgaatgagtccttctcgcaactggttaacctgtcgaagaagattacggactacggcgca
gaggacgagaagatagtggaccctgacttggagcggaaggagggcgaaattgatgaggac
gtgggtgtcgccgttgtcttcgacgaggaggagcaagaggacgaggaagaggaaggctac
gaggtacgagaagagactgacgatgaggatgaggaaatgggagaggaccaagaggatcag
gcacccgaagagaccctcgaaggtgaggagctggttgtcggcggagagtcttctgcccgg
actacagccaaggcaaaggcggataaggatatcgtctcgcctcatcaagtggacgcgttc
tgggtgcagcgccaggtatccgaggtataccctgaccctgtcacggcggcggacaaggcc
tcctccgtcctgtcaatactcggctcagaatctagccttcgggattgcgagaaccagctc
atggaactgttcgagtaccaaagcttccctctcatcacgaagttcctgaagaacagggac
gtgattgtctggtgtaccaagttgcaaagaagtgacgcggatgaacgagtcaacgtcgag
gttgctatgcgagagaagggagttggatggattctgcgtgaactcgcgggtgacagacag
gcgaaggctcgtgacgcggacgcgatggacgttgaccaggacgcgaagaaggttgacgtc
ccaaagacaggtacgctcgcacccggctcaacggtccaacctaagagagttgtcgatttg
gagagcatggccttcagccagggtgggcatctgatgtcgaataagaagtgcaagctccct
gaagggagtttcaagcgcgctaggaaagggtttgaggagatccatgtgcccgcgcctaag
aagaagacgagtgatgccgcgacggtacccatctccgatcttccggcatgggcaagggag
gccttccctgggtacaagcacttaaaccctgtccaaagcaaactgtaccccactgcattc
ggtaccgatgagcctatcctgttatgcgctcctacaggcgccggaaagaccaacgtcgcg
gttctcactattctgaatgagatgtcaaagtggagggacgaagccaccgggcaattcgat
ctggattcatggaaggtcatctatgttgcgcccatgaaggcgctcgtgcaagagcaagtt
ggccaattcagcaagcggctcgcaccctacggaatcaaagtcggggagttaactggtgat
gctcagatgacgaagcagcaaatttccgagacgcagatcatcgtgactaccccagagaag
tacgatgtcattacgcgcaagagctccgacacgagctacaccaatcttgtccgactcatc
atcatcgacgagattcatctcctgcacgatgagcgtggccctgttcttgagagtatagta
gccaggactataaggcggatggagcaaacaggcgagtacgtgcgcctcgtcggtctttca
gctactttgcccaactaccaggacgtcgcgaccttcttgcgcgtggacgagtcgaaggga
ttgttctacttcgatgcatccagtcggccatgtccgttgcagcagcagttcgtcggtgtc
accgagaagaaggcaattaaacggtaccaggtcatgaacgaggtctgctacgagaaggtc
ctcgatcaagccggcaagaatcaggtactcgtgttcgttcactcgaggaaggaaacggcc
aagactgccaaatttatacgagatatggctatcgagaaggagaccataacgcaatttgtc
aagcctgactctgccgttcgggaaattctgaacgaggaggctggcaacgtgaaggatggc
aatctgaaagacctgttgcccttcgggtttgctatccaccacgccggcatgacaagggag
gaccgtggtttggtggaggaactgttcgccgatggctccattcaagttcttgtttgcaca
gcgactctcgcctggggtgtcaaccttccagcgcattgcgtcgtgatcaagggcacgcaa
atttacaaccccgagaagggtcggtgggtggagttgtcccctcaagacgttttgcagatg
cttggccgcgccggtcgcccacagtatgacacgttcggagaaggtgtcatcatcacgaat
cactccgagctccagtactacttgagtttgatgaatcaacagctccctatcgaatctcag
ttcgtcgcgaaattagcagataacttgaatgcggagattgtcttaggcacaatacggaat
cgcgacgaagctgtccagtggctgggctacacgtatttgtacgtccgcatgctcaagtca
ccgagtctctatagtgtcggcgtcgattacgaggacgaccagggtctggtccagaagcgt
gccgacatcattcactctgccgctgccatgctcgagaaatgtcacctcatcaagtacgaa
cgggcgtccggtcgcttccaaagcaccgaacttggtcgtatagcatctcattactacgtc
acctacaactctatggcgacatacaacaagcacctgcgtccgtctatgcagatgctcgag
ctcttcagggtgttcgctctgtcgaacgagttcaaatacatacccgtgcgacaagaggaa
aagctggagcttggaaagctgctggagcgcgtcccgatccctgtgaaggaaagtgtcgat
gagcctgctgccaaaatcaacgtcctcttgcaggcgtacatttcacagctgaaacttgaa
ggtttcgcattagtggcggacatggttttcgtccagcagtcagcggggcgtattctccgt
gccatgttcgagatatgcctgaagcgaggttgggctgtgccagccagagctgccttggat
atgtgcaagatggtcgaaagacggatgtggggttccatgacccctttgcgccaattcaag
cgggtgcctcctgagattatccgtaaagctgaggggaaacaattcccatggtaccgttat
ttcgatctgaaccctcccgagattggggaattgctaggtattccgaaggcaggccaacta
gtccatcgcctcgtccacagtttccccaagcttcaattgcaagcgcaggttcagcccatc
acccggtcgctgctgagaatagacctttccatcatcccggacttccgctgggatgagaac
atacatggttccgccgagacattctggatcatcgtggaggatgtcgatggcgagatcata
ctgttccacgacacattcttgctgcgtcaaaagtatgctgaagatgagcataacgtaacg
atcacggtaccgatgttcgagccagtaccccccaactattacatctcagtcatctcggat
cgatggcttcatgcggagactcgtctacccatttctttcaagcatctgatcctcccggag
aagtttccgcctcccaccccgttgctggacctccaacctctccccctctccgctcttcac
aacaaggaattcgagagcatttatgcttcgaccattcagacgttcaacaagattcaaact
caagtgttccaagctctttacacgtccgatgagaatgtctttgtaggcgcacccactggc
agcgggaagaccatctgcgccgaatttgctcttctaaggctgtggagcaagcgcgagcaa
cctcgggcggtttgcatagaacctttccaagaaatggtcgatcagcgggttgctgaatgg
cggtcgaagttcggcaatctgcagggcgggaaggaaatcgtgagtctcaccggggagacc
gctgccgatctacgactgctagagaagggcgacgttattgtctgtacacctacgcagtgg
gatgtcatatcgcgtcgctggcggcaacggaagaacgtccagactattggtttgctcatt
gcagatgaggttcaactagtgggaggtgagatcggtccgacgtatgaggtggtcatttcc
cgaacccggtacgtctcggcgcagacagatatcaagactcgtattgtggcctgtggcgtc
tcgctcgccaatgctcgtgatctgggcgaatggatcggtgctccttcacatgccatcttc
aacttccctcccagcgctcgcccactggatatggacatccatttgcaaagcttcaacatc
cctcacttcccatccttgatgattgccatggcgaagccagcctacctgtccgtcatggag
tattcgcccaacaagcccgtcattatcttcgtgccctcccgccgtcagtgccgactgaca
gcagacgacatcttgacacattgcggtgctgatcaggacgagaaccggttcttgcatgtg
gaagaagctgacctccaaccgcatctcgatcatgtgagcgatcaggggctagtagagacc
cttaagcacggtatcggatattatcacgaggctctaagcaagcaggataagcgtatcgtg
gaacgtttgttccaatctggtgctattcaagtcctcattgcctcaaaggataccgcatgg
gcacttccagtcgccagctacatggtcatcataatgggtgtccagtactacgaaggcaag
gagcatcggtatgtcgactatcctgtgatggatgtactgcagatgatgggccgagcctgc
cgaccattggaggacgaccggagtcgctgcgtattaatgtgccagcaaactcgtaaggac
ttctacaagaagttccttgccgagggtctgccgatcgagtcacatttaccgacgcatctg
ctgcatgattatttccttgctgagattgctgtcaagacgattgagaacaagcaagacgcc
atggatatcctgacgtggacgtacttctaccgacgaatgacccagaacccgaactactat
aatctgcacaacgtcagtcaccaggcgctgtccgaccacttatctgagttagtggagaat
actctgaatgacctggttaactcgaaatgcatcactatcgaggacgagatggatgtgtct
gccttgaacttaggcatgatcgctgcctactataacatctcttacgtcacggttgaggtc
tacacgctgtcgttgaaagagcgaactaagctcaagggtatcctcgaagtagtgtcgtcg
tctgccgagttcgagacgataccgatccgcaagcacgaggatgtcctgctccgccgtatc
tacgaccgtgtcccagtcaagctggaccgggcagacttcgaagcgccgcatttcaagacg
ttccttcttctgcaggctcacttctcccgcctgcaattaccgcctgatttggcggccgat
caggtgctcgttctggagaaggtgctgaacttgctatctgcctgcgtggacgtcctatcg
tcgaacgcgtggctgaacgctttgcgtgcgatggatctgtcgcagatgtgcgtgcaggcg
atgtgggaaactgactcgccactcaagcagatccctcattttgagcccgatgtaattgcg
cgctgtaaggaagctggcgtcgagtcggtgtatgatattatggagatggaggatgacaag
cgcaacgctgtcttgcagatggatgctcggcagatgcgcgacgtggccacctttgtcaat
tcgtatccgaccctggatgttaaccacgagcttgtcaagggcgagtacacagcgggtgcg
cctatcaccttgaaggtggctctcagcaaggacgcggacgaggaggaagactccaatgat
gatcagaccgttgtcgcgccgtactaccccctgaagaaaatggcaaattggtggcttgtg
gtgggcgatcccaagagccagcaactgttgtcgatcaagaaggtcacagtgacgaagagc
ctggccgtgaagctcgagctgacgcttcctgagggcaagcacagcctgcacctatatgtg
atctgcgacagttacgtgggcgcagatcatgacattccgctggagacaattgaagtagcg
gagggagaggagagtgatagcgatgaggacatggagagcggggacgagatggaggagtag
DBGET
integrated database retrieval system
