KEGG   Gloeophyllum trabeum: GLOTRDRAFT_63792
Entry
GLOTRDRAFT_63792  CDS       T03130                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K14004  protein transport protein SEC13
Organism
gtr  Gloeophyllum trabeum
Pathway
gtr03013  Nucleocytoplasmic transport
gtr04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:gtr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    GLOTRDRAFT_63792
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    GLOTRDRAFT_63792
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gtr03019]
    GLOTRDRAFT_63792
   04131 Membrane trafficking [BR:gtr04131]
    GLOTRDRAFT_63792
Messenger RNA biogenesis [BR:gtr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     GLOTRDRAFT_63792
Membrane trafficking [BR:gtr04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    GLOTRDRAFT_63792
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    GLOTRDRAFT_63792
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    GLOTRDRAFT_63792
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_WDR3_2nd WDR55 Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-prop_WDR75_1st Beta-prop_WDR41 Beta-prop_WDR36-Utp21_2nd Beta-prop_SCAP EIF3I Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 19307570
NCBI-ProteinID: XP_007868434
JGI: Glotr1_1_63792
UniProt: S7Q0U9
LinkDB
Position
Unknown
AA seq 333 aa
MAAANASEPIPVETAHEDMIHDAQLDYYGKRLATCSSDRTVKVFDIVEGEARKTPGHTLR
GHTGPVWQVAWGHPKYGSILASCSYDGKVLIWKEQAPGAGWTKIKEHTYHTASVNSVSWA
PHELGPILACASSDGKISVVTFKNDGQWDFDAFNGHAIGCNAISWAPAVQPGSLIVPQNN
TVPGQAPPTLQTVKRFASAGCDNLVKIWAFNEESHSWVEEETLEGHTDWVRDVAWAPNIG
LPRSYIATASQDKTVFIWTKDTPTSPWVKTALDPTGASVTPASATPPRFPDVVWRVSWSL
AGNILAVSCGDGKVTLWKENLKGTWECVSDMTS
NT seq 1002 nt   +upstreamnt  +downstreamnt
atggcagcagcaaatgctagcgaaccaatccctgtggaaacggctcatgaagacatgatt
catgatgcccagctggactactacgggaaacggttggccacttgctcatctgaccgaaca
gtgaaggtcttcgacattgtggaaggagaggctcgcaagaccccggggcacacgctgagg
gggcacacaggacctgtatggcaggtcgcatggggacatccgaaatatggctctattttg
gcgtcgtgttcttacgatgggaaggtgttgatctggaaggagcaagctcctggagcgggt
tggacgaagattaaggagcacacgtatcatactgcttcagttaattccgtgtcatgggca
ccacacgagttgggacccatcctcgcatgcgcatcctccgacggcaaaatatctgtcgtg
acgttcaaaaatgacggccaatgggacttcgacgccttcaatggccacgccatcggctgc
aacgccatctcctgggctccggccgtacagccaggctcactgatcgtgccgcagaataat
acggttccaggccaggctccacccacgttacaaacagtcaagcgattcgccagcgcgggc
tgcgataacctcgtgaagatctgggcgttcaacgaggagtcgcattcctgggtcgaggag
gagacactcgaaggccacactgactgggttcgggatgtcgcgtgggcaccgaacattggc
ctgccgagaagttatattgcgactgcttctcaggataaaactgtgtttatttggaccaaa
gacactccgacatcgccatgggtcaagacggcactcgaccctacgggcgcatctgtaacg
ccggcctcagctactccgccgaggttccctgacgtcgtatggcgagtgtcgtggagtctt
gccgggaacatcttggctgttagctgcggggacggtaaggtgaccctgtggaaagagaac
ttgaaggggacgtgggagtgcgtgagtgacatgaccagctaa

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