KEGG   Gloeophyllum trabeum: GLOTRDRAFT_64258
Entry
GLOTRDRAFT_64258  CDS       T03130                                 
Name
(RefSeq) histone deacetylase
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
gtr  Gloeophyllum trabeum
Pathway
gtr03082  ATP-dependent chromatin remodeling
gtr03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:gtr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    GLOTRDRAFT_64258
   03083 Polycomb repressive complex
    GLOTRDRAFT_64258
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gtr03036]
    GLOTRDRAFT_64258
Enzymes [BR:gtr01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     GLOTRDRAFT_64258
Chromosome and associated proteins [BR:gtr03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     GLOTRDRAFT_64258
   HDAC complexes
    Sin3A-HDAC complex
     GLOTRDRAFT_64258
    BRAF-HDAC complex
     GLOTRDRAFT_64258
    REST complex
     GLOTRDRAFT_64258
    SHIP complex
     GLOTRDRAFT_64258
    MiDAC complex
     GLOTRDRAFT_64258
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     GLOTRDRAFT_64258
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    GLOTRDRAFT_64258
  Chromatin remodeling factors
   NuRD complex
    GLOTRDRAFT_64258
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 19307600
NCBI-ProteinID: XP_007868870
JGI: Glotr1_1_64258
UniProt: S7PYP0
LinkDB
Position
Unknown
AA seq 546 aa
MSLPDRRRVTYYFDPEVGGYTYDAPQKGEGRHCMKPHRIFITHHLVRAYNMLDKMHVLRA
KRATPEDMTRFHTDEYVNFLQRVTPETAEDLTYKYTRFLSADGDNPAFEGLFEFCSISAG
GSLAAARAISSSAADIAINWAGGLHHAKKREASGFCYINDINLAILELLRTYPRVLYIDI
DCHHGDGVEEAFYTTDRVMTCSFHKFGDFFPGTGDYRDTGFGKGKGYSVNVPLREGITDE
AYKSLFEPIISKILEVFLPSAVVLQCGADSLAGDKLGELNLSMHGHAACVQFLRKQNVPL
MLLGGGGYTAKNVARTWCYETACALGIEDTIDPMLPYNAYFEWFGPRYRLEVPGTNREDY
NLRDGYVHEIRQIVLQQLSQLQPAPSVGIHDVPSESVGDHLGWRMAESEPRDELDKDLAQ
HARLIYKIQEAEAYSDETDDTDSDSLSRRMPRRAPRKRMSIVTNKVLDTPQLHEFEREHE
AYCGHVGKHTRRRFFEWDNSWRGPDSVVEVYTLPGLGVPGVSVGESMAGGRRGYDLDVDD
GMILMD
NT seq 1641 nt   +upstreamnt  +downstreamnt
atgtctttgccagaccggagacgagttacatattattttgacccggaagtgggaggatat
acttatgatgcacctcagaaaggggagggcagacactgcatgaaaccacaccgcatattc
ataacgcatcacttggttcgcgcatacaacatgcttgacaagatgcatgtcttgcgcgcc
aaacgcgctaccccagaagacatgactcggttccacacggacgaatacgtgaatttcttg
caacgcgttacaccggagaccgctgaggatctaacttataagtataccagattcctgagc
gcggacggcgataaccccgctttcgagggcttattcgagttctgctcgatatccgccgga
ggctcattagcggctgcacgcgcaatctcttccagcgccgccgacatcgccatcaactgg
gcgggtggtctgcaccacgcaaagaaacgcgaggcgtccggcttctgctacatcaacgac
atcaacctcgccatcctcgagctcctccgcacatacccccgcgtcctctacatcgacatc
gactgtcatcacggcgacggcgtcgaagaggcattctataccaccgaccgggtcatgaca
tgcagctttcacaagtttggcgacttcttcccgggtacgggagattacagggacacgggg
tttggcaagggtaaaggctattccgttaacgtgcccctgcgtgagggtatcacggatgaa
gcgtacaagagtctctttgagcctatcatcagcaaaatactcgaagtcttcctaccctcc
gcagtggtactccaatgtggcgcagattccctggccggcgacaagctcggcgagctcaac
ctgagcatgcatgggcacgccgcgtgcgtgcagttcctccgtaagcagaatgtcccgctg
atgctccttggcggcggcggatacaccgcgaagaacgtcgcccggacgtggtgctacgag
accgcctgcgcgctcggcatcgaggacaccatcgaccccatgttgccgtacaacgcgtac
ttcgagtggttcggcccgcggtaccggctcgaggtcccggggaccaaccgggaggattat
aatctgagggacggatatgttcacgagataagacagattgtgctgcaacagttgtcccaa
ttacagcctgcgccttcggtcggcatacacgacgtccccagcgagagtgtgggggatcac
ctaggctggcggatggcagaaagcgaaccacgggacgaactagacaaggacttggcccaa
catgcacggcttatctacaagatccaagaggccgaagcctactcggacgagacggacgac
accgattcggactcactgagccggcgcatgccccggcgcgcccccaggaagcgcatgagc
atcgtcacgaacaaggtgctggacaccccgcagttgcacgagttcgagcgcgagcatgag
gcctactgcgggcacgtcggaaagcacacgaggagacgattctttgagtgggacaatagt
tggcgggggcccgacagcgtcgtcgaagtgtatactttgcctggacttggtgttcccgga
gtcagtgtaggggagtcgatggccggcggcaggaggggctatgacctggatgtcgatgat
ggtatgatcttgatggattga

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