Gloeophyllum trabeum: GLOTRDRAFT_64427
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Entry
GLOTRDRAFT_64427 CDS
T03130
Name
(RefSeq) DEAD-domain-containing protein
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03013
Nucleocytoplasmic transport
gtr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GLOTRDRAFT_64427
03015 mRNA surveillance pathway
GLOTRDRAFT_64427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtr03019
]
GLOTRDRAFT_64427
Enzymes [BR:
gtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GLOTRDRAFT_64427
Messenger RNA biogenesis [BR:
gtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
GLOTRDRAFT_64427
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
19307608
NCBI-ProteinID:
XP_007868986
JGI:
Glotr1_1_64427
UniProt:
S7PYJ4
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MSTLQKDADGFYTPAPEGEAAPAASSSAKPEDAEEKNEDASDLIKSTFEVAVTLADQQAD
PNSPLFSIKTFEELGLHADLLKGIYDMGFTKPSKIQERALPLLLKNPPQNMIGQSQSGTG
KTAAFVLTMLSRINFSKNQPQALCLAPSRELARQIMSVVVAMGKFTPVQTEYAIKDHLPR
DVTKITAHIVVGTPGTMFNLVRKRILDVSEVSVFVLDEADNMLDQDGLGEQTLKVKNALP
KGKPIQIILFSATFPDHVRSFASKFAPNANKIELQKNELSVEGIRQFYMDCKNEDQKYDI
LVSLYKLLTIGQSIIFCQHRHTADRISQRMTAEGHKVASLHGAKDGAERDAIIDNFREGR
EKVLITTNVVARGIDILQVNMVVNYDLPLMSERDNYGNKADMRPDIETYIHRIGRTGRFG
RKGISINFVHDKRTWEQMHQIEVALGREIARIETTDLDTMEEQMKKHLK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtctacattgcagaaggacgctgacggattctacacgcccgcacccgagggtgaagct
gctcctgcagcaagtagcagcgcaaagcccgaggacgcggaggagaaaaatgaggatgca
agcgatctgatcaagtctaccttcgaggtcgcggtgacgctcgccgaccagcaagctgat
ccaaattcaccgctatttagtatcaaaacattcgaggagcttgggctacatgcggatcta
ttgaagggcatctatgacatgggattcacaaagccctcaaagattcaggagcgcgcttta
ccactgttgctgaagaacccgccccagaacatgatcggtcaatcacagtccggaacgggg
aagaccgccgcttttgtccttactatgctcagtcggatcaacttctccaagaaccagcct
caggctctctgcctagcaccctcccgtgaacttgcgcgacaaatcatgtctgtagtagtg
gccatgggtaagttcacccccgttcaaaccgagtacgcgatcaaggaccaccttccgcgg
gacgtgaccaagatcaccgcgcatatcgtcgtcggcacaccagggacgatgttcaacctg
gtccgcaagaggattctggatgtcagcgaagtgagcgtgttcgtgctggacgaggcggac
aacatgttggatcaggacgggctgggcgagcagacgctgaaagtgaagaatgcgctgccg
aaaggcaagcccatccaaatcatcctgttctctgctaccttccccgatcacgtccggtcg
ttcgcgtccaaatttgcaccgaacgcgaacaagatcgagttgcagaagaatgagctgtcc
gttgagggtatccgacagttttacatggattgcaagaacgaggaccagaaatatgatatc
ctggtgtcactatacaagctgctgacaattggtcagagcataatcttctgccaacatcgt
catacagcagacaggatctcgcagcgcatgacggccgaggggcacaaagtcgcctcgctg
cacggcgcgaaggacggcgcggaacgtgacgccatcatcgacaacttccgtgaggggcgc
gagaaggtcctcatcacgacgaacgtcgtcgcgcggggtatcgatatcctgcaggtcaac
atggtggtcaactacgacctgccgctgatgagcgagcgggataactatgggaacaaagct
gatatgcgacccgatatcgagacgtacatccatcgaattggccggacaggtcggttcgga
cggaagggtatctccatcaatttcgtgcacgacaagcgcacatgggagcagatgcaccag
atcgaggttgcacttggccgggaaatcgctcgtatagagaccaccgacctggacacgatg
gaggagcaaatgaagaagcacttgaagtga
DBGET
integrated database retrieval system
