Gloeophyllum trabeum: GLOTRDRAFT_64852
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Entry
GLOTRDRAFT_64852 CDS
T03130
Name
(RefSeq) SWI/SNF complex protein
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
GLOTRDRAFT_64852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gtr03021
]
GLOTRDRAFT_64852
03036 Chromosome and associated proteins [BR:
gtr03036
]
GLOTRDRAFT_64852
Transcription machinery [BR:
gtr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
GLOTRDRAFT_64852
Chromosome and associated proteins [BR:
gtr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
GLOTRDRAFT_64852
PBAF complex
GLOTRDRAFT_64852
GBAF(ncBAF) complex
GLOTRDRAFT_64852
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
SANT_DAMP1_like
Myb_DNA-bind_7
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
19307625
NCBI-ProteinID:
XP_007869297
JGI:
Glotr1_1_64852
UniProt:
S7RD25
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MDSPKRVGSPSPGSSDAKRIRLTVPQQNQGVEAVDPEIAPGKKSELEPIQGGDIGNLPGE
PPAETRPETGGRVRVLGEGEEDGGDVEMGEGGDDEGDSGEENEDEDPAQLEATRVRLEDQ
ARKYLAAQTHEVIIPSYAAWFDMSKIHSIEKRALPEFFNSRNKSKTPAIYKDYRDFMINT
YRLRPSEYLTVTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDPDSRPATLAPPFTGHYR
VIIDTPRGLQSLHPGTRPPNHPHAQGVNGAPKPGSTSTPASLELRSNIYQTTAKASRPIN
AEQAKELANGASAPGGNGRATASITFQCDTCGVDCTAVRYHSLKVKNFELCPPCYLDGRF
PSTMFSGDFVKLTNAATTSGNAHLSDNDWSDDEILRLLEGVEMYDDDWSLIEEHVGTRSA
QQCIRKFLELPIEDPYLETEGSMGGLRYARIPFEQADNPVMSVVAFLAGVVGPGVAAEAA
KTALHALTDGATKEEEKQDAKPPEAGEGATAGAQGDKMDQDAPSQGQEGASSKPSTPTPP
SNEMVTDKGEEKQPSARIPHSKVVRAADLALKASGKAAGALADAEDAQIRSTLANLIKLT
LTKLELKMAQFEELEDILEEERKALETARQQVVEERVTLKRTLEKVRSELQKNGAAAAAD
ATSQTSLGTSGQGTIVSQVQEGTAMEGDSGPISGGNMAQLS
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggattcacctaaacgcgttggctcaccttctcctggctcctccgatgcgaaacggatt
cgtctgaccgttccacagcaaaaccaaggtgtcgaggctgtggatcccgaaattgctcct
ggcaaaaagagtgagctggagccaatacaaggcggggacataggcaatttacccggcgag
ccgcctgccgagacgcgtccagagacaggtgggagagtgcgcgtcctgggggaaggggag
gaagatggcggtgacgtggaaatgggagagggcggcgacgacgaaggagattctggcgag
gagaacgaagacgaggatcccgcacagttagaagcgacgagagttcgtctggaggatcag
gcgcgcaaatacttggctgcccagacgcacgaagtcatcattccctcctacgctgcctgg
ttcgacatgtccaaaattcattccatcgagaagcgcgccctgcccgaattcttcaattcc
agaaacaagtccaagacccctgccatttacaaggactaccgcgacttcatgattaacacc
taccgcctccgcccttcggaatacctcactgttacagcttgcagaaggaacctggcgggt
gacgtttgcgctatcatgcgcgtgcatgctttcttagagcagtggggtctgataaactac
cagattgatcccgactcgcgtcctgccacattggcaccaccattcacaggccactaccgt
gtcattatcgacacaccccgtggacttcagtcgctacaccctgggacgcggccgcccaac
caccctcatgcgcagggcgtgaacggtgctcccaagcccggttccacgtctactccagca
tccctcgaacttcgctccaacatctatcagactacggcgaaagcctcgcggcccatcaat
gctgagcaggcaaaggagctggctaacggtgcttctgctcctggtggtaatggtcgcgcg
accgcatcgatcacgttccagtgtgatacgtgcggtgttgactgtacggccgtgcggtac
cattccctcaaagtgaagaactttgagctctgcccaccgtgttaccttgacggtcgcttt
ccctcgaccatgttcagcggcgatttcgtcaagctgaccaacgctgccaccacgagcggc
aacgcccacctcagcgacaatgactggtcggacgacgagattctccggctgctggagggc
gtggagatgtatgatgacgattggtcattgattgaggagcatgtgggcacgcgatctgcg
cagcagtgcatacgcaaattcctggaactccccatcgaagatccatatctggagacagaa
ggctccatgggcggccttcgatatgcccgtatacccttcgaacaagcagacaacccggtg
atgagcgtcgtcgctttcctggctggcgttgtcggacctggggtcgccgctgaggccgcc
aagacggcattgcatgccctcacagatggtgccacaaaagaggaagaaaagcaggacgcc
aaaccccctgaagcgggtgagggcgcaactgccggcgctcagggtgataaaatggatcag
gatgctccaagtcagggccaagagggcgcttcaagtaaaccgagcactccgacccctccg
tcaaacgagatggtcacggacaagggagaggaaaagcagccttcggcccggatacctcat
tccaaagtcgtccgcgccgccgacctagccctcaaggcatctggcaaggccgcgggggcc
ttggcggatgccgaggacgcgcagatccgctctacgctagcgaacctcatcaaactgact
ctgacaaagctcgagctcaaaatggcacagttcgaggagctggaggatatcttggaggaa
gagaggaaggctctcgagaccgcacggcagcaggtcgttgaggaacgcgtgacattgaag
cgtacgctcgagaaagtgcgtagtgagctccagaaaaatggcgctgccgccgcggcagat
gctacgtcccagaccagcctcggtacgagcgggcagggcactattgtctcccaggtgcaa
gagggcaccgctatggaaggcgactcgggtccgattagcggaggaaatatggcgcaactc
agctga
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integrated database retrieval system
