Gloeophyllum trabeum: GLOTRDRAFT_65299
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Entry
GLOTRDRAFT_65299 CDS
T03130
Name
(RefSeq) hypothetical protein
KO
K12590
exosome complex component RRP46
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GLOTRDRAFT_65299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtr03019
]
GLOTRDRAFT_65299
Messenger RNA biogenesis [BR:
gtr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
GLOTRDRAFT_65299
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
19307649
NCBI-ProteinID:
XP_007869633
JGI:
Glotr1_1_65299
UniProt:
S7PW26
LinkDB
All DBs
Position
Unknown
AA seq
307 aa
AA seq
DB search
MAARPDGRKAEDLRPVHVVYEGLDRSDGSAQFSFGKSTPTLTSVSGPIEPRPQSEHPSYT
SLEIYVRPLHSLPSTQARHVASVLKTIFSQTILLNQHPRTLVQMVVQALSVSEVVGKSGV
GAGTAGVFGPGTIASMVNSASLALINAGSIPLRGVVCAVSVGRLTRPSPSNAASTSPLIL
DPSPEEIPHLTAQGVFAFLFSSALPASSRAPSSGSPPPSELIWSNWSSTNLGMTKVGDGE
LQELGRAHEMAREGAIRVWWEMRRSVPEMEAGAARSKRAAAEPAGQAGGAGSGEESDSDD
DEERMEI
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggccgcacgtcccgatggccgcaaggcagaagacctccgtcctgtccacgttgtctac
gaggggttggatcggtcggacgggtcagcgcaattctctttcggcaagtccacgccgact
ctaacgtcagtgtcaggacccatagaacctcgaccacagtctgaacatccgtcctacaca
tctctggaaatctacgtgcgccccctccactccctgccgtcgacccaagctcgccatgtc
gcgtccgtgctcaaaaccatcttctcccaaacgatcctgcttaaccaacacccgaggact
ctagttcagatggtcgtccaggcgctctcggtgagcgaggtcgttggcaaatccggcgtc
ggggcgggcacggcgggcgtctttgggccggggacgatagccagcatggtgaacagcgcg
agcttagcattgatcaacgctggcagcatccctctgcgcggtgtcgtatgcgccgtatcc
gtcggccgcttgacccggccgtctccatccaatgctgcgtctacatctcccctgattctg
gatccctccccggaagaaataccgcacctcactgcgcaaggtgtctttgcctttctgttc
tcttctgctctgcctgcctcgtcgagggccccgtcgtctggctcgccgccgccgagcgag
ttgatatggagcaactggtctagcaccaaccttgggatgacgaaggttggggacggagaa
ctccaggagctgggtcgggcacacgagatggccagggagggtgcgattcgggtttggtgg
gagatgaggaggagcgtacctgagatggaggcgggagcagcgaggtcgaagcgggctgca
gctgagcctgcaggtcaagcgggcggggctggttccggagaagagtcagatagtgacgat
gatgaggaaaggatggaaatttag
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