Gloeophyllum trabeum: GLOTRDRAFT_67848
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Entry
GLOTRDRAFT_67848 CDS
T03130
Name
(RefSeq) WD40 repeat-like protein
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
gtr
Gloeophyllum trabeum
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gtr04121
]
GLOTRDRAFT_67848
Ubiquitin system [BR:
gtr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
GLOTRDRAFT_67848
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
WDR54
Beta-prop_SCAP
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
19307832
NCBI-ProteinID:
XP_007860766
JGI:
Glotr1_1_67848
UniProt:
S7QLN9
LinkDB
All DBs
Position
Unknown
AA seq
649 aa
AA seq
DB search
MDDGFEGPDAYVEGDEDQDELDIEFQAEQATDAAEGEESAVQSIMGALFDLQGGQSATGG
GEAGNAHSEGNVSGFTIRELTRILGMRYGGLGNVRIGQDEDDDEDEEDDEDYVTSATNNR
SWFPEVKEPQKAGADLLMSGEFGRTGHKFRSAHGRKQSNIYRTMRDRAAVLRPLYRADLA
CDLVPNSNGTAVASYAHNAYSGQFSDDSSFYYTCVQDFSLNVYDMTAPPTPALPNRVHRT
RPSRYMTDMDEDHRTTMKVINTIQGHPGRWTITDSHLSPDNERMIYASITPIVYMTNVRE
PEPEQIPLRFGDPPRRSHLWGFDDERFGIWSCRFSADGTEVVAGGDGKIFVYDLKADRRT
VKIEAHQDDVNSCCWADSASGNILISASDDTFIKVWDRRSLGSSYKPSGVLVGHTEGITN
VAAKGDGRYVISNGKDQALRLWDLRKMRSNEEYETFADKFYGNSQYDYRYGHYPRPRRLA
HPQDCSVMTYRGHAVLKTLIRCHFSPAETTGSQYIYSGSADGRIHIWSLDGRVIQVLDRA
HTLPMAFDPSDKELPPSASAYRDRTCVRDVSWHSKEPVLMSVGWNGGRGSIVARHEWKGL
TKMGNNLEDWTERQREERDERARRRSERYNIPGAFENSDDSDDLEGLED
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggacgacggcttcgaagggccggatgcctacgtcgagggcgatgaagatcaggacgag
cttgacatcgagttccaggccgaacaagcaacggatgctgcagaaggcgaagagtccgca
gtgcagagcatcatgggagctctgtttgacctacagggaggacaatctgctacaggcgga
ggtgaggccggaaacgcacactccgagggcaatgtcagtgggtttaccatccgcgagctg
acccggattctgggcatgcggtacggtggtctggggaatgtcaggataggacaggatgaa
gatgacgacgaggatgaagaagacgacgaggactacgtgacttccgctaccaacaatcga
tcatggtttccagaagtgaaggagccccagaaagctggtgccgacctgcttatgagcggc
gagtttggacgtactggccataaattcagatcggcacacggtcggaaacagtcgaatatc
tacagaaccatgagggatagagcggcggtgctacggcctctctatcgggcggacctggca
tgcgaccttgtccctaattctaatggtaccgccgttgcctcctacgcccacaatgcgtat
tcgggtcaattctcagacgattcttcgttctattacacatgcgtgcaagacttcagcttg
aatgtgtatgacatgacagcgccacccacacccgcccttccgaaccgagtacaccgcacc
cgcccgagcagatatatgacggatatggacgaggaccatcggacaactatgaaggtaatc
aatacaattcagggacatcctggccgttggacaattaccgactcccatctcagtccggat
aacgaaaggatgatatatgcatctattacacccattgtttatatgaccaacgtccgggaa
ccagagccagaacagataccattgcgtttcggagatcctcctagacgatcacacttatgg
ggattcgatgatgagagattcggcatatggtcatgcagattctccgctgacggaacagag
gtcgttgctggtggagatggcaagatatttgtatatgatctcaaggcggatcgaaggaca
gtcaagatcgaagctcaccaagacgatgtcaatagttgctgttgggctgacagtgcttca
ggcaatattttgatcagcgcatctgacgacacgttcattaaagtctgggataggcggtcg
ctcggctcgtcgtacaagccgtccggtgtgttagtaggtcacactgaaggtataacgaat
gttgctgcaaagggggacggtcgatatgttatatccaacggcaaggatcaggcactgcgc
ctttgggacttgcgaaagatgaggagcaacgaggaatacgagacttttgcagataagttt
tacgggaactcgcagtacgactatcggtatggtcactatccaaggccacgacgcctagca
catccccaagactgcagtgtgatgacataccgtgggcatgccgttttgaagactctgatt
aggtgtcacttttcgcctgccgagactaccggatcgcagtacatctactctggctccgct
gacggaagaatacatatctggtctctggatgggcgtgtcattcaagtccttgacagagca
catactcttcctatggccttcgatccttcagacaaggaattgcccccttctgctagtgct
tatcgggatcgtacatgcgtccgcgacgttagctggcattccaaggagcctgttctgatg
agtgttggctggaacggcggtcgaggtagtattgtggcaaggcatgaatggaagggtctc
accaagatgggtaacaacctagaagactggacagaaaggcaacgggaagaaagggatgag
cgagccaggcggcggtcggaacgctacaatattccgggtgctttcgagaattcggatgat
tccgacgatttagagggattggaggactaa
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