KEGG   Gloeophyllum trabeum: GLOTRDRAFT_67848
Entry
GLOTRDRAFT_67848  CDS       T03130                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K11801  DDB1- and CUL4-associated factor 11
Organism
gtr  Gloeophyllum trabeum
Brite
KEGG Orthology (KO) [BR:gtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gtr04121]
    GLOTRDRAFT_67848
Ubiquitin system [BR:gtr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     GLOTRDRAFT_67848
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 WD40_MABP1-WDR62_2nd WDR55 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_EIPR1 WD40_MABP1-WDR62_1st WDR54 Beta-prop_SCAP Beta-prop_DCAF4 NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 19307832
NCBI-ProteinID: XP_007860766
JGI: Glotr1_1_67848
UniProt: S7QLN9
LinkDB
Position
Unknown
AA seq 649 aa
MDDGFEGPDAYVEGDEDQDELDIEFQAEQATDAAEGEESAVQSIMGALFDLQGGQSATGG
GEAGNAHSEGNVSGFTIRELTRILGMRYGGLGNVRIGQDEDDDEDEEDDEDYVTSATNNR
SWFPEVKEPQKAGADLLMSGEFGRTGHKFRSAHGRKQSNIYRTMRDRAAVLRPLYRADLA
CDLVPNSNGTAVASYAHNAYSGQFSDDSSFYYTCVQDFSLNVYDMTAPPTPALPNRVHRT
RPSRYMTDMDEDHRTTMKVINTIQGHPGRWTITDSHLSPDNERMIYASITPIVYMTNVRE
PEPEQIPLRFGDPPRRSHLWGFDDERFGIWSCRFSADGTEVVAGGDGKIFVYDLKADRRT
VKIEAHQDDVNSCCWADSASGNILISASDDTFIKVWDRRSLGSSYKPSGVLVGHTEGITN
VAAKGDGRYVISNGKDQALRLWDLRKMRSNEEYETFADKFYGNSQYDYRYGHYPRPRRLA
HPQDCSVMTYRGHAVLKTLIRCHFSPAETTGSQYIYSGSADGRIHIWSLDGRVIQVLDRA
HTLPMAFDPSDKELPPSASAYRDRTCVRDVSWHSKEPVLMSVGWNGGRGSIVARHEWKGL
TKMGNNLEDWTERQREERDERARRRSERYNIPGAFENSDDSDDLEGLED
NT seq 1950 nt   +upstreamnt  +downstreamnt
atggacgacggcttcgaagggccggatgcctacgtcgagggcgatgaagatcaggacgag
cttgacatcgagttccaggccgaacaagcaacggatgctgcagaaggcgaagagtccgca
gtgcagagcatcatgggagctctgtttgacctacagggaggacaatctgctacaggcgga
ggtgaggccggaaacgcacactccgagggcaatgtcagtgggtttaccatccgcgagctg
acccggattctgggcatgcggtacggtggtctggggaatgtcaggataggacaggatgaa
gatgacgacgaggatgaagaagacgacgaggactacgtgacttccgctaccaacaatcga
tcatggtttccagaagtgaaggagccccagaaagctggtgccgacctgcttatgagcggc
gagtttggacgtactggccataaattcagatcggcacacggtcggaaacagtcgaatatc
tacagaaccatgagggatagagcggcggtgctacggcctctctatcgggcggacctggca
tgcgaccttgtccctaattctaatggtaccgccgttgcctcctacgcccacaatgcgtat
tcgggtcaattctcagacgattcttcgttctattacacatgcgtgcaagacttcagcttg
aatgtgtatgacatgacagcgccacccacacccgcccttccgaaccgagtacaccgcacc
cgcccgagcagatatatgacggatatggacgaggaccatcggacaactatgaaggtaatc
aatacaattcagggacatcctggccgttggacaattaccgactcccatctcagtccggat
aacgaaaggatgatatatgcatctattacacccattgtttatatgaccaacgtccgggaa
ccagagccagaacagataccattgcgtttcggagatcctcctagacgatcacacttatgg
ggattcgatgatgagagattcggcatatggtcatgcagattctccgctgacggaacagag
gtcgttgctggtggagatggcaagatatttgtatatgatctcaaggcggatcgaaggaca
gtcaagatcgaagctcaccaagacgatgtcaatagttgctgttgggctgacagtgcttca
ggcaatattttgatcagcgcatctgacgacacgttcattaaagtctgggataggcggtcg
ctcggctcgtcgtacaagccgtccggtgtgttagtaggtcacactgaaggtataacgaat
gttgctgcaaagggggacggtcgatatgttatatccaacggcaaggatcaggcactgcgc
ctttgggacttgcgaaagatgaggagcaacgaggaatacgagacttttgcagataagttt
tacgggaactcgcagtacgactatcggtatggtcactatccaaggccacgacgcctagca
catccccaagactgcagtgtgatgacataccgtgggcatgccgttttgaagactctgatt
aggtgtcacttttcgcctgccgagactaccggatcgcagtacatctactctggctccgct
gacggaagaatacatatctggtctctggatgggcgtgtcattcaagtccttgacagagca
catactcttcctatggccttcgatccttcagacaaggaattgcccccttctgctagtgct
tatcgggatcgtacatgcgtccgcgacgttagctggcattccaaggagcctgttctgatg
agtgttggctggaacggcggtcgaggtagtattgtggcaaggcatgaatggaagggtctc
accaagatgggtaacaacctagaagactggacagaaaggcaacgggaagaaagggatgag
cgagccaggcggcggtcggaacgctacaatattccgggtgctttcgagaattcggatgat
tccgacgatttagagggattggaggactaa

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