Gloeophyllum trabeum: GLOTRDRAFT_68361
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Entry
GLOTRDRAFT_68361 CDS
T03130
Name
(RefSeq) nucleoporin
KO
K14312
nuclear pore complex protein Nup155
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GLOTRDRAFT_68361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtr03019
]
GLOTRDRAFT_68361
Messenger RNA biogenesis [BR:
gtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
GLOTRDRAFT_68361
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
19307881
NCBI-ProteinID:
XP_007860966
JGI:
Glotr1_1_68361
UniProt:
S7QM04
LinkDB
All DBs
Position
Unknown
AA seq
1355 aa
AA seq
DB search
MFKTAGPSSVVSRNAIPGSKSPAAPDLPALQSASRVLQDQISKDAQLVPDVGDLLTNPQM
PFSSSYSVFNDNQHVPFAKRRIAHIPDAVFYHYDSANVTSHMGLMPEIDRVWITIDHKLF
LWDYVEGQELHSFVDQPDVISHVALVKPKPNIFIDEIVYLLVICTPVSVLLLGLSVSTPP
PGSRSLKDIKLYATDMSITTEVEMTSVIGTKNGRIFMCGAHDGNLYELHYQEKEGWFGKK
VQLVNHSVSGMQSLFPMLATPRSEDNFKLLVSDPSRDCFYALSSRNTISIYRPNGEKSVQ
QLQTLSSLYNIAQQKVPGHPAITPSSFQIVSLHVIEKNEAPRSGVQLMATTVNGVRLYFG
PSSAGYGYSFNVMNSSSSIPGHRPLQLVHVRLPPVNLLHPDDGLFTASALASGQPPPQPA
YPPYVVSRIENVCYTSGLTIAAEPGDGMDGNDFILCMAPDLTKIGELGQVKEIQPQQPPR
PPMQSYYPVTTPGPSRPPLTEYATMIEISGRTWAIAPIPRTPYHSSTPSESPVPVAANEL
AVQFCEPPTQFMILTNAGLVYLWKRRALDYLRAVIEDFHADGNPQPILDFRDSFGRDQTC
AMLLALASGNTFLDIDNFASPTLSTGKIANVSSEIAAVAKQAFYDFGERPMWAERATLGT
SENAGSAIFSGRREGFAFYFARLVRPLWKVKLVQTGALGLAECGIPEETLVTTQKNLHAL
KEFLDKNPHLFHSAPGDKAGARGAAASEQEAWKAEQSSVSQLQALLARTIEAISFLLLLV
DYKLADLIAQCDPETQKMITSLTFEGLVVTSEGITAARALVNVVIDQQIGQQISVDTISE
VLQERCGSFCSTDDVLFYKAKENVRKAAETVNLAEKQNWLNESLRLFIKAGAILTLEKLR
EICGEYQQLRYPKGAVELPLHYAQVVDAERLGQEYWYAGCPASDRRSEFWERRKQCYDLV
LDSLTVFEERAGAAPEQGDGPEDPETIRSHAFALAFASNDEMFHSTMYEWLLGKGVADEL
LEMRPPYLEAHLRREPITVQKYQLLWQFYVKNGQPLRAAEVLAALADSLQLGLTLEERLE
YLTLAVGNAKSHPISAEGRHETAIAFLAELEDKLEVAQVQLEMYHTLVPHIKDAEEVRER
IQLLGRRLFTMTELFELYAAPFDLREMQLLILHVSDHRDEHLVRPIWNRIFADTTAGVDP
KEGADQLISKVVSLGHRFYPSESAFPLQYIASLLVRFELANKGVIPYGWAPRVLVQCGVP
YGEIWDIFNEMYESQVPPFNDQSNVQAISSDIAVLLTDWMQEAQRPLSSAAREFPVDRID
GAVGLYLSELDPNRTETKAAYEALRRYVRTGGKVW
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaaccgccggtccttcctctgttgtatcacgaaatgcgatccccggttcaaaa
tctcccgccgccccagacctacctgccctccagagtgcaagtagggtcttgcaggaccaa
atatcaaaggatgctcagttggtgccggatgttggggatctattgacgaacccccaaatg
ccattttcctcgtcgtacagcgtgttcaacgacaatcagcatgtcccttttgcaaagcgg
aggatagctcacatccccgacgctgtcttctaccactatgacagcgccaatgtaacctca
catatgggtctgatgcctgaaattgatcgtgtatggattaccattgaccacaagctcttt
ctatgggactacgtggaaggccaggaattgcattcattcgtcgaccagcctgatgtcatt
tcccacgtcgctcttgtgaagcccaagccaaacattttcattgacgagatagtctatctg
cttgtcatctgcacgccggtgtccgtccttctcctcggcctatctgtgtcgacgcctccc
cccggcagtcgcagtctcaaagatataaaactttacgcgaccgacatgtcaataaccacg
gaagttgaaatgacatcggtgatcggtacgaagaatggccgaatattcatgtgcggggct
cacgacggcaacttgtacgagttgcattatcaagaaaaggaaggctggttcggtaagaaa
gtgcaactggtaaatcactcggttagcgggatgcagagtttgttccctatgctcgctact
cccagatcagaagacaacttcaaactattggtttccgatccgtcaagggactgcttctat
gcgctttcttccagaaacacaataagcatctacaggccaaacggagagaaatcagtccaa
caactgcagacgctctcgagtctgtacaatatcgctcaacagaaggtacctggacatcct
gccatcacccccagtagtttccagatcgtcagcttgcatgtcattgagaagaatgaagcc
ccacgatcaggcgtgcaactcatggctacaacagtgaacggtgtccgcctgtacttcgga
ccttcgtcagccggatacgggtactccttcaatgtaatgaatagcagttcttccatacct
gggcaccggccactacagctggttcatgtccgcctaccacccgtcaaccttctacatcca
gatgacgggctatttactgccagcgcactggcttcagggcaaccacctccgcaacctgca
tatccgccttacgttgtgtcaagaatagagaacgtctgctacacttctggtcttacgata
gctgcagaacccggcgacggcatggatgggaacgatttcattctctgcatggcgccagat
ctcaccaagattggagagcttgggcaagtaaaggagatccagcctcagcaaccaccgcgt
ccaccaatgcagtcgtattaccccgtcactacacctggcccgtcacgcccgcctttgact
gagtacgcgaccatgatcgagatatctggtcgtacttgggcaatcgcacctattcctcgc
acaccttatcacagctcgactccgtccgagtcccctgtacccgtggcagcaaacgagctc
gctgtccagttttgcgagcctccaacgcaatttatgatcctgacgaacgccggactagta
tatctgtggaagagaagagcgcttgattacttgcgagcggttattgaagatttccacgca
gatggcaatcctcagcctattcttgatttccgagacagttttggccgagatcaaacgtgt
gctatgttgctcgcactcgcaagtggcaacacattcttggatatcgataacttcgcatca
ccgacgctgagtactggaaagatagccaacgttagctccgagatagcggctgtagcaaaa
caagccttctatgactttggggagcgacccatgtgggcagaacgggcaacgcttggcaca
agtgagaatgcggggagtgcgatcttcagtggccgtcgagaaggattcgcattctacttt
gcgagactcgtacgaccattgtggaaagtgaagttggtccaaaccggggctctcggttta
gcagagtgcggcatacctgaggagactctcgtgacgacacagaagaaccttcacgctctg
aaggaattcttggacaagaatccgcatctgttccattccgctcctggggacaaagcaggt
gcgagaggcgccgctgcaagcgagcaagaagcgtggaaggccgaacaaagctcagtttca
caacttcaagcgctgcttgctaggaccatcgaagctatatcgttccttctccttttggta
gactacaagctagctgaccttattgcccaatgtgaccctgagacccagaagatgattacc
tcacttacttttgagggtctcgtggtaacaagtgaaggcattactgcggccagggccctc
gtgaacgtggtgatcgaccagcagatagggcaacagattagcgttgacaccataagcgaa
gtgctccaggagcgatgtggctcgttctgtagtacagatgatgtcctgttttataaggcc
aaagagaatgtgcgtaaagccgcggaaacagtcaatttggcggagaagcagaattggttg
aacgagtcactgcgactattcataaaagcgggggccatcctgacattagagaaacttcgc
gagatatgtggtgaatatcagcagctaagatacccgaaaggggctgtggaattgccactg
cactacgctcaggtcgtcgacgccgaacgtcttggtcaggagtactggtatgccggctgc
cctgcgagcgaccgacgttcagagttctgggaacgaaggaagcaatgttatgacctagtg
ttggactccctgaccgtattcgaggagagggcaggtgcagcacccgaacaaggagacgga
ccggaagatccggaaactattcgtagtcatgccttcgcactagctttcgccagcaacgac
gaaatgttccattccaccatgtatgaatggctactgggcaagggagtcgccgatgaactg
ttggagatgcgtcctccttacctcgaagctcacttaagacgcgaaccgataacagtgcag
aaatatcaattgttatggcagttttatgtcaaaaatggtcagccactacgcgcagcagag
gtacttgccgctctcgcagattctttgcagctcggactaacgctggaggagcggctggag
tatctgaccctggccgttggcaacgcgaagtcacacccaatctcagctgaggggagacat
gagacggcaatcgctttcctagcagaattggaggacaagctggaggttgcgcaagtgcag
cttgaaatgtaccacaccctcgtaccccatattaaagacgcagaagaagtcagagagagg
atccagttgctcgggcgacgattgttcaccatgactgagctcttcgagttatacgccgcg
cctttcgatcttcgagagatgcaattgctgattctacatgtctctgatcatcgagatgaa
catctagtgagacctatttggaacagaatattcgcggataccaccgcaggggtcgatcct
aaagaaggcgcagaccagttgatctcaaaggttgtttcgcttgggcaccggttctacccc
tcggagagcgcgttccctctgcaatacattgcatctctgcttgttcgctttgagctagct
aacaagggtgtaatcccgtacggatgggcgccgcgcgttctggtgcagtgtggagtgcct
tatggcgagatctgggacatctttaatgagatgtacgaatctcaggtcccaccattcaat
gaccaatctaatgtccaagctatctcctcggacatcgcggtgcttctaacagactggatg
caagaagcacagcgaccgctatcatctgctgctcgggagttcccagtagatcggatagat
ggcgcggtgggcctgtatctctctgagttggatccgaataggacagaaaccaaagctgcc
tacgaggcactcagacggtacgtgcggacaggcggcaaggtctggtga
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