Gloeophyllum trabeum: GLOTRDRAFT_69361
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Entry
GLOTRDRAFT_69361 CDS
T03130
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
gtr
Gloeophyllum trabeum
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gtr03009
]
GLOTRDRAFT_69361
Enzymes [BR:
gtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GLOTRDRAFT_69361
Ribosome biogenesis [BR:
gtr03009
]
Eukaryotic type
90S particles
Helicases
GLOTRDRAFT_69361
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
19307972
NCBI-ProteinID:
XP_007861371
JGI:
Glotr1_1_69361
UniProt:
S7QNM8
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MEAFQLLSRGGVKFDKTRFKDDVRLFNKEKGNSAKRKEAVKYDSGELPAELDFFKYAKGG
PAVKRKAGENAEAHDGKRRRVDEDEEDEDDEEDELGREGSDAESSSAQPTQRHRVTAKGS
NVPGPADSFEALKERYHLSSRLLTNLASNGFKHPTGIQSHGVPILLEGRDLAAISPTGTG
KTLAYTLPVLQALGAPAASAKSTAGAGVRAVILAPTRELAHQIHNEFLRMAEGRKWRIVL
FSKATAATLADKNARDKVDVIISTPLRLVASLQNGTLDLSNVRHLVLDEADRMLDTEFLE
QVQEVVAACTHPSIQKAVFSATLPAGAEKLAMEMLRDPIRIVVGLKDTPLPLIAQSLTYV
ADESSKLPTLLTYLSQPYNPPVLIFVSSQPRATSLAEELIINGVPNVDCLHAGMTKKERE
DAVTRMRRGESWVMVSTEVMARGMDFKGVREVINYDFPTSVQSYIHRIGRTGRAGREGKA
VTYFTNEDAPFLKSIANVILQSGSTVPEWIMKLPKPSKMKRKAMGKVQRGDFVDKARKIG
RNDAIKKRDMIAGSKRRKEKAARNGESSEQLENRGGDR
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggaggcttttcaactgctctctcgtggaggggtgaagtttgacaaaactcggttcaaa
gacgacgttcggttgtttaataaagagaaggggaattcggccaaaaggaaggaagcagtt
aaatatgacagtggcgaactccctgccgagcttgacttcttcaagtacgcaaagggcggc
ccggccgtcaaacggaaagctggtgaaaacgcggaggcacatgacggaaagcggagaaga
gtggacgaggacgaggaggacgaggatgatgaggaggatgaactaggacgagaaggaagt
gacgcagaatcttcaagtgctcaacctacccaacgacaccgtgtaacggccaaaggatcc
aatgttcctgggccggccgattcttttgaggcgctgaaggagcgataccacctctcctcc
cgtctcctaacaaatctcgcctcgaatggcttcaagcatcccacaggtatccagtcgcac
ggcgtgcctattctgctggagggccgtgatctagctgccatatcgccgacaggtacggga
aagacactcgcgtacaccctcccggtcctgcaagccttgggcgcaccggcggcaagtgcc
aagtctaccgctggtgcaggcgtccgggccgtaatcctcgcgccgactagagagcttgct
catcaaatacacaacgagttcctacgtatggcagaaggtcgaaaatggcggattgtcttg
ttcagcaaggccacggctgctacgctagcggacaagaatgcgcgggacaaagtagacgtg
attataagcacaccgttgcgtttggtggcgtcgttacaaaatggtacactggacttgagc
aacgtaagacaccttgtgctggatgaggccgatcgtatgctcgacaccgaatttttagag
caagtccaggaagttgtagcggcctgcacgcatccatctatccagaaggcggtcttcagt
gctactctacctgcgggagccgagaagctcgctatggagatgctcagggaccccatacgt
attgtcgttggtctgaaagatacccccctacctcttattgcacagtccctaacctacgtc
gccgacgagtcgtccaaactcccgactctgttgacgtatctgtctcaaccctataatccc
cccgtcctcatattcgtatcgtctcagccccgtgcaacctctttagccgaagagttaatc
atcaacggcgtgcctaacgtagactgcctgcatgcgggcatgacgaagaaggaaagggaa
gacgcggtgacgcgtatgcggagaggcgagagctgggtgatggtcagtacggaggtcatg
gctcgcggcatggacttcaagggtgtcagggaagtcatcaactacgacttccccaccagt
gtccagagctatatccataggatcggacggactgggcgcgctggtcgggagggcaaggcg
gtgacgtacttcacgaacgaagacgcacctttcctgaaatctatcgccaacgttattctg
caatctggctctactgtccccgagtggatcatgaaattgccgaagccctcgaagatgaag
cggaaggcaatgggcaaggtccagaggggcgacttcgtcgacaaggctcggaagatcggt
aggaacgatgcgatcaaaaaaagggatatgattgctggctcgaagcgtcggaaagaaaag
gcggcgcggaacggcgagtcaagcgagcagttggaaaaccggggaggggaccgataa
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