Gloeophyllum trabeum: GLOTRDRAFT_69878
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Entry
GLOTRDRAFT_69878 CDS
T03130
Name
(RefSeq) hypothetical protein
KO
K12586
exosome complex component RRP43
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GLOTRDRAFT_69878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtr03019
]
GLOTRDRAFT_69878
Messenger RNA biogenesis [BR:
gtr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
GLOTRDRAFT_69878
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
19308024
NCBI-ProteinID:
XP_007862017
JGI:
Glotr1_1_69878
UniProt:
S7RZK4
LinkDB
All DBs
Position
Unknown
AA seq
286 aa
AA seq
DB search
MAAAVASSSTSEQAALKAATFQRLHPRIYLERFLAENVRPDGRNVDQWRDVTVNVGSITT
ADGSSLVRVGDTTIVCGVKAEIAEPELDYPEEGYIVPNLDLPAICSPRFKPGPPSEEAQV
LSDRLNEAFLASGIVDTSSLSIRSGKAVWVLYIDATCINYDGNAFDAALIAMVAALRNTR
LPRATYDEDTGRTICSRKESIPLRVNSSPLSMSFGIFESSHLLADPTSFEEPLLDTTVTV
VLKEGGTLVSAIQVGLGGTGSQDVLMSCIAAAKRRLAEVGSQFYLS
NT seq
862 nt
NT seq
+upstream
nt +downstream
nt
tatggcggcagcggtagcatccagctccacctcagagcaagctgctctcaaagcagcaac
attccagcgactgcacccacgaatatacctggaacggtttcttgctgaaaatgtccgacc
ggacggtcggaatgttgaccagtggcgcgacgtcaccgtgaacgtcggatctattacgac
cgcagatgggtcttcgttggtgcgagttggggacacgacgatcgtctgcggggtgaaggc
ggagattgctgaacctgagctcgactaccctgaggaagggtacatcgtacccaatcttga
cctcccagccatatgctctcctcgatttaagccgggtcctccgagcgaggaagctcaagt
cctctcggacaggctgaacgaagcatttctcgcctcgggaattgtcgacacatcttcgtt
gagcatccgcagcggtaaagcagtttgggtgctatacatcgacgcgacatgcatcaacta
cgacggaaatgccttcgacgcagctttgattgcgatggttgcggcgcttaggaatactcg
tctcccgagggccacatacgacgaagatacaggtcgaaccatctgctcccggaaggaaag
tataccgcttcgggtgaacagttcgccactgtcaatgtcctttggtatcttcgaatcatc
ccatcttttagcggatcccacgtccttcgaggaaccactgttggataccacagtaacagt
agtactgaaggaaggtggtacgttggtgtccgcgattcaagtgggccttggagggacagg
ctcgcaagatgttctcatgtcatgtattgccgccgctaaaagacgcctcgctgaagtggg
cagccaattctatctttcataa
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