Gloeophyllum trabeum: GLOTRDRAFT_71257
Help
Entry
GLOTRDRAFT_71257 CDS
T03130
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GLOTRDRAFT_71257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtr03019
]
GLOTRDRAFT_71257
Messenger RNA biogenesis [BR:
gtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
GLOTRDRAFT_71257
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
GLOTRDRAFT_71257
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
19308162
NCBI-ProteinID:
XP_007862571
JGI:
Glotr1_1_71257
UniProt:
S7QJ15
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAARKLQTEIDRTLKKVAEGVELFESIYEKMQNSTNQTQKEKLEMDLKTQIKRLQRLRDQ
IKTWAASNDIKDKSALLENRRLIETQMEKFKACEKEMKTKAFSKEGLIQSAKLDPKAQEK
LDTASWVREQVEALQQQVEHTEAEIEAAQMAGGKKKGKSGGQTAERVEEMEKLNERRRWH
TSRLEIILRLLDNGSLPVEKITALKDDVQYFVESNAEEDFEEDEGIYDDLNLDEEEEKFG
IAADESSSDESEEASEDLPPRTPNKKQQHEDDSSSKRDGSPVLKKGNNVTLQLRKPSSAA
DSAPKPPPNPNFAQQPMSSILKAGLPPAPRQPAQLPPIRYAAAAAAAVNPPSSTSATPSV
SSPSQAPASTNATTPPSSSALSPPQPTASQDHAATSSPSLTHPSVTSPMLSSASVSALQQ
DGSSYYSHHDSPALSEAVSGSLAPTSSSPQRSASRSVSISSPIVDSASPAQPQAASNDSQ
KPPAAAEQPPAPSPPAPAPAPSQQQQQQALPVPIGAPTAPSPLPQQVQQYPQYPPGVKVP
EQQQMPMQAVGAQRPPSTQQRGSVPPQMQQARTAFPGSLSDLVVSFENVKQKAVHRMGNL
DQVNKLLEGSYSSMPQPQDTEKPKYYVPRNYFPTPSYYPQQPSPILSTAGLFAQLDVETL
FYVFYYHPGTYLQYLAAKELKRQSWRFHVKYLTWFQRHSEPQAITEEYEQGVYVYFDWEG
SWCQRKKSDFRFEYRYLSED
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgcgcaagctacaaacggaaatcgaccgtacactaaagaaggtcgcggagggc
gtcgagctcttcgagagcatctacgaaaagatgcagaactcgaccaaccagacacagaag
gagaaactggagatggacttgaagactcagattaaacgattgcaacggctacgtgaccag
atcaagacgtgggcagcaagcaatgacatcaaggacaagtcggcgctgctcgagaatagg
aggttaatcgagacacaaatggagaagtttaaggcatgcgaaaaggagatgaaaacaaaa
gcgttctccaaagagggtcttattcaatctgctaagctcgatcccaaggctcaggagaag
cttgacacggcttcgtgggtacgggagcaggtggaagcgctgcaacaacaagtggagcat
acggaggcggagatcgaggccgcacagatggctggtgggaagaagaagggtaagtctgga
gggcagacggcggagcgggtggaggagatggagaagctgaatgagcgccggaggtggcat
acaagccggctggagatcatcctgcggttattggacaacgggagcttgccggtggagaaa
ataacggcactgaaggatgatgtgcaatacttcgtcgagagtaatgcggaggaagatttt
gaagaggatgagggaatctacgacgacctaaatctcgacgaagaggaagagaagtttggt
atcgctgcggacgagtcctcgagtgacgaatccgaagaggccagcgaagacttaccacca
cgaacaccaaataagaaacaacagcacgaggacgacagctcgagtaaacgtgatggcagc
ccggtactcaagaagggcaacaacgtcacattacaactacggaagccatcatcagcagca
gattcggcaccgaaacctccgccaaatccaaattttgcacaacagccaatgtcgagcatc
ctcaaggctgggctacctccagcacctcgacaacccgcacagctacccccaatacgttat
gcggcggcggcagcagcagcagtaaatccaccatcgtctacaagtgcaaccccatcggtt
tcctcaccatcccaggcccccgcgtccacaaatgccactactcctccctcgtcgtcagca
ctgtcaccaccacaaccgacggcatcacaggatcatgcggccacgtcgtcaccgagcttg
acgcatccttctgtgacgagtccaatgctcagctctgcttctgtttctgcgctgcagcag
gacgggtcgtcgtattactcgcaccacgattcgccagcattgtcagaagccgtgtctgga
tcgctggcgccgacgtcatcgtcgccacaaagatcggcatcccgaagtgtgtcgatatct
tcgccaattgtcgactctgcatcaccagcacagccgcaggcggcgtccaacgactcgcaa
aaaccacccgcagccgccgagcagccgccagcaccctcgccgcccgcgccagcacccgcg
ccctcgcagcagcagcagcagcaggcgctccccgtcccgattggcgcgccgacggcgccg
tcgccgctgccgcagcaggtgcagcagtacccgcagtacccgccgggggtgaaggtgccg
gagcagcagcagatgccgatgcaggcggtgggcgcgcagcggccgccgtcgacgcagcag
cgcgggtcggtgccgccgcagatgcagcaggcgcgcacggcgttcccgggctcgctgagc
gatctggtggtgtcgtttgagaatgtgaagcagaaggcggtgcaccggatggggaacctt
gaccaggtgaataagctgctcgaggggagttattcgagtatgccgcagccgcaggatacg
gagaagccgaagtactacgtcccgcggaactacttcccgacgccgagctactacccgcag
cagccgagcccgatcctgagcacggcgggcctgttcgcgcagctggacgtggagacgctg
ttctacgtgttctactaccacccggggacgtacctgcagtacctggcggcgaaggagctg
aagcggcagtcgtggcggttccacgtgaagtacctgacgtggttccagcggcactcggag
ccgcaggcgatcacggaggagtacgagcagggggtgtatgtgtactttgactgggagggg
agctggtgtcagcggaagaagagcgattttaggttcgagtatcggtatttgagcgaggat
tga
DBGET
integrated database retrieval system
