KEGG   Gloeophyllum trabeum: GLOTRDRAFT_71374
Entry
GLOTRDRAFT_71374  CDS       T03130                                 
Name
(RefSeq) transcription initiation Spt4
  KO
K15171  transcription elongation factor SPT4
Organism
gtr  Gloeophyllum trabeum
Pathway
gtr03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:gtr00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    GLOTRDRAFT_71374
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gtr03021]
    GLOTRDRAFT_71374
   03019 Messenger RNA biogenesis [BR:gtr03019]
    GLOTRDRAFT_71374
Transcription machinery [BR:gtr03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     GLOTRDRAFT_71374
  RNA polymerase I system
     GLOTRDRAFT_71374
Messenger RNA biogenesis [BR:gtr03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     GLOTRDRAFT_71374
SSDB
Motif
Pfam: Spt4 Thioredoxin_2
Other DBs
NCBI-GeneID: 19308176
NCBI-ProteinID: XP_007862629
JGI: Glotr1_1_71374
UniProt: S7QJ73
LinkDB
Position
Unknown
AA seq 122 aa
MASGVTAAIPAQARAKQLRACLLCSIIQTPADFRKNGCPNCEELMQMKGSPDRIQVCTTT
YFDGVIAVVDPEQSWVARWQRISKYVRGMYAVRVKGRVPEDVEAELEARGIKYRPRDQTD
QD
NT seq 369 nt   +upstreamnt  +downstreamnt
atggcctctggtgtgaccgccgccatcccagcccaagctcgtgccaagcagctccgggcg
tgtctactatgctcgatcatccagacgcccgcagattttcgtaaaaacgggtgtccaaat
tgcgaggagttgatgcagatgaaaggctcgccggaccgcatccaagtatgtacgacgaca
tattttgacggggttattgctgtggtggatcccgagcagagctgggtggcgaggtggcag
cggatatcgaagtacgtgcgcggcatgtatgcggtacgggtaaaaggccgagtcccggag
gacgtagaggcagagctcgaagcgcggggtatcaagtatcggccaagagaccagacggac
caggattag

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