Gloeophyllum trabeum: GLOTRDRAFT_71374
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Entry
GLOTRDRAFT_71374 CDS
T03130
Name
(RefSeq) transcription initiation Spt4
KO
K15171
transcription elongation factor SPT4
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
GLOTRDRAFT_71374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gtr03021
]
GLOTRDRAFT_71374
03019 Messenger RNA biogenesis [BR:
gtr03019
]
GLOTRDRAFT_71374
Transcription machinery [BR:
gtr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
GLOTRDRAFT_71374
RNA polymerase I system
GLOTRDRAFT_71374
Messenger RNA biogenesis [BR:
gtr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
GLOTRDRAFT_71374
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
Thioredoxin_2
Motif
Other DBs
NCBI-GeneID:
19308176
NCBI-ProteinID:
XP_007862629
JGI:
Glotr1_1_71374
UniProt:
S7QJ73
LinkDB
All DBs
Position
Unknown
AA seq
122 aa
AA seq
DB search
MASGVTAAIPAQARAKQLRACLLCSIIQTPADFRKNGCPNCEELMQMKGSPDRIQVCTTT
YFDGVIAVVDPEQSWVARWQRISKYVRGMYAVRVKGRVPEDVEAELEARGIKYRPRDQTD
QD
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
atggcctctggtgtgaccgccgccatcccagcccaagctcgtgccaagcagctccgggcg
tgtctactatgctcgatcatccagacgcccgcagattttcgtaaaaacgggtgtccaaat
tgcgaggagttgatgcagatgaaaggctcgccggaccgcatccaagtatgtacgacgaca
tattttgacggggttattgctgtggtggatcccgagcagagctgggtggcgaggtggcag
cggatatcgaagtacgtgcgcggcatgtatgcggtacgggtaaaaggccgagtcccggag
gacgtagaggcagagctcgaagcgcggggtatcaagtatcggccaagagaccagacggac
caggattag
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integrated database retrieval system