Gloeophyllum trabeum: GLOTRDRAFT_71424
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Entry
GLOTRDRAFT_71424 CDS
T03130
Name
(RefSeq) beta and beta-prime subunits of DNA dependent RNA-polymerase
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GLOTRDRAFT_71424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gtr03021
]
GLOTRDRAFT_71424
Enzymes [BR:
gtr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GLOTRDRAFT_71424
Transcription machinery [BR:
gtr03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
GLOTRDRAFT_71424
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF7577
Motif
Other DBs
NCBI-GeneID:
19308182
NCBI-ProteinID:
XP_007862648
JGI:
Glotr1_1_71424
UniProt:
S7S1U7
LinkDB
All DBs
Position
Unknown
AA seq
1404 aa
AA seq
DB search
MKESVSHQAPKVIKKLQFSLLNAQDVVKVSEFEVTHRDLYTATDRAPVKNGVLDRRLGTS
EKNAYCETCGLNSVDCVGHYAYIKLVLPVFHIGYFKHTIGILQCICKTCARVLLEEPDRR
TFLKRFRRPNLENYQRQGITKALNTLARKAVYCPHCGATNGTVKKAGALKIIHDKFRAKK
TAEEMERWKRTFAPAVEAQKELGVYVSRAVHEDLNPLKVLDLFKRISDEDCELLGLRPEF
GRPEEYIWQYISVPPVCIRPSVAQDGASNEDDLTVKLTEIVFTNALIKKGLTTGAPTPQL
MESWEFLQLSVAMYINSELPGVPSQPGQRPIRGFCQRLKGKQGRFRGNLSGKRVDFSGRT
VISPDPNLRIDEVAVPERVAKILTYPERVTQHNLETLRKAVRNGCDVHPGANYVTAGNSG
FKKFLKFGNRAAIAEQLRIGDVVERHIVDGDIVLFNRQPSLHRLSIMSHRVKVRPWRSFR
LNECVCTPYNADFDGDEMNLHVPQTEEARTEALELMNVKYGIVSPRNGEPVIAAIQDFIT
ASWLISRRDQFFDRRQFTQICSYFGDANMHIDIPPPTIWKPVRLWTGKQVFNVLMRPNKE
SKILVNVETKCNKEEKTKASVYPKGMKPASDLSPNDGWLVVVNSEIMCGVMDKATLGSGK
KKSIFGVILRDYGPHEAALAMNKVAKLCARWLANFGFSLGINDVMPGPVLSQKKDTLVEK
AYANCLDLIALAKKGKLENKPGCNQEQTLEAMISAVLSKVRDECGETCMRELSRHNAPLI
MATCGSKGSVINVSQMVACVGQQIISGHRVPDGFQDRSLPHFPKKSREPPSKGFVRNSFY
TGLSPTEFLFHAISGREGLVDTAVKTAETGYMQRRLMKALEDLATHYDLSVRNATGGMVQ
FTYGDDGLDPGCLEGDAQPVDLVRAWSHASTISSRAGRGLLPFEILEMVDAELSQKRYIS
ESTAAFRATVRGFVREHIVEKLAEIRKSRGMFEALEREEEWDADTDLSLGASEADKAIVD
NKAKVTEAQIKTFMDLCWIKYVKAKIEPGSTVGAVGAQSIGEPGTQMTLKTFHFAGVASM
NVTLGVPRIKEIINAAKLISTPIISCKLVTSDSEASARIVKGRLEKTLLGDIASVIEEAW
APEYTYIGIIIDGDAIQKLQLEVTLDDIKWAIVGAKKLKVKQESITVIPRKNRLRIYVDG
PDKYYRLRDLKRVLPDVVVKGVPSIQRAVINIKDKDDAKGQKGDRELLVEGYGLQKVMTT
EGIVGEYTTSNHIIEVGAVLGIEAARRTIINEIQYTMASHGMNIDPRHIMLLGDVMTYKG
EVLGITRFGVAKMKDSVLMLASFEKTTDHLFDASAFGKTDDISGVSESIIMGNPAANCGT
SLPALISPIPRISKPRKLLFEGAL
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagagcgtgtcccaccaggccccgaaagtaatcaaaaagctccagttcagcctc
ctcaatgcccaggacgtcgtcaaggtctccgagtttgaagtcacccatcgcgatctgtac
accgcgactgacagggcacccgtgaagaatggcgtcctggatcggagactgggtacatct
gagaagaacgcgtattgcgagacctgcggcctgaactctgtggactgcgtcgggcactat
gcgtacatcaagctcgtcctgcccgtattccacattggctactttaagcacaccatcggc
atcttgcaatgcatatgcaagacctgcgcccgcgttctcctcgaagagcccgaccggcgc
accttcctcaaacgctttcgacgacccaacctcgagaactaccagcggcagggcatcacc
aaggcgctcaacaccctcgcgcgcaaggccgtgtactgcccgcactgcggcgcgaccaac
ggcaccgtcaagaaggccggcgcgctcaagatcatccacgacaagttccgcgcgaagaag
accgcggaggagatggagcgctggaagcgcacgttcgcgcccgccgtcgaggcgcagaag
gagctcggcgtgtatgtgagccgcgccgtgcacgaggacttgaacccgctcaaggtgctc
gacttgttcaagcggatatcggacgaggactgtgaattgctcggtctacgtcccgagttt
ggccgccccgaggagtacatctggcagtacatctcggtaccccccgtgtgtatccgccct
tcggttgctcaggacggtgcttccaacgaggacgacctgactgtcaaattaaccgaaata
gtgttcacgaatgcactgattaagaaaggtctcaccaccggagccccgactccccagctc
atggaatcatgggaattcctccaactctccgtcgcaatgtacatcaactcggagctccca
ggcgttccctcccagcccggccaacgccccatccgcgggttctgccagcggctcaagggc
aaacagggccgcttccgtggcaacctctccggcaagcgcgtcgacttctcgggacgcacc
gtcatctcgcccgacccgaacctgcgcatcgacgaggtcgccgtgccggagcgcgtcgcg
aagatcctcacgtaccccgagcgcgtcacgcagcacaacctcgagacgctcaggaaggcg
gtgcgcaatggctgcgatgtgcaccccggcgcgaattatgttactgcagggaatagtggc
ttcaagaagtttttgaagtttgggaaccgtgcggcgattgcggagcagttgaggattggg
gatgtggtggagaggcatattgtggatggggatattgtgctgtttaatcggcagccgagt
ttgcataggttgtccattatgagtcatcgagtgaaggtcaggccctggcggtcgttccgt
ctcaatgaatgtgtctgtacaccatacaacgctgactttgacggcgacgaaatgaatctc
cacgtacctcagacggaagaagcgcgaacagaagcgctcgagctcatgaacgtcaagtac
ggcatcgtctccccgcgcaacggcgagcccgtcatcgccgccatccaggacttcatcacc
gcctcctggctcatctcccggcgcgaccagttcttcgaccgccgccaattcacacaaata
tgctcctacttcggcgacgcaaatatgcacatcgacatcccaccgccgacgatctggaag
cccgtgcggctgtggacgggcaagcaggtgttcaacgtgctcatgcggcccaacaaggag
tcgaagatcctcgtgaacgtcgagacgaagtgcaataaggaggagaagacgaaggcaagc
gtgtatcccaaaggaatgaagcctgcgagtgatcttagcccgaatgatgggtggttggtc
gtggtgaacagcgagattatgtgcggggtgatggataaggcgacgctggggagcgggaag
aagaaaagtatatttggagtcattttgagggattatggcccacatgaggcggcgttggcg
atgaataaggtggccaagctttgtgcgcgctggttagcaaattttggattttcactaggt
atcaacgatgtcatgccgggacctgtcctctctcagaagaaggatactttggtcgagaag
gcctatgcgaactgtctggacttgatcgctctcgccaagaagggaaagctggaaaataag
ccgggatgtaaccaggaacagaccctcgaggctatgatctctgctgttctttccaaagtc
cgtgacgagtgtggtgaaacttgcatgagggagctcagccggcacaatgcaccgcttatc
atggctacctgtggttccaaaggctccgtcattaatgtctcccaaatggtggcttgtgtc
ggtcaacagattatttccggtcatcgtgtacccgatggttttcaggaccgttccctcccc
catttccccaaaaagtcaagggagccgccgtcaaaaggtttcgtacggaacagtttctat
accggcttgtcgcctacggagttcttgttccacgctatctcgggaagagaaggtttggtt
gacactgcagtcaagactgcagagactggttacatgcaacggcgactcatgaaggccctg
gaagacctcgccacgcattacgacttgtcggtacgaaatgcgacgggcggcatggtgcag
ttcacgtacggagatgacggccttgacccaggctgcctggaaggcgacgcccaaccagtt
gacttggtgcgggcgtggagccacgcatccactatatcctctagagcaggccgtggtcta
ctgccttttgaaatcctggagatggtagatgctgagttgtcgcagaaacgttatattagc
gagagcaccgcggccttccgtgccacggttcgcggctttgttagggagcatattgttgag
aaattggcggagatacgtaagagccgtgggatgtttgaagccctcgagcgagaggaggaa
tgggacgctgatacggacttgtccctcggagcttctgaggctgacaaggctatcgtcgac
aacaaggcgaaggtgaccgaagcccagatcaagactttcatggacctctgctggatcaag
tacgtcaaagctaagattgaacctggctcgaccgttggtgccgtcggcgcgcaatccatt
ggtgaacccggtactcagatgactctgaaaactttccatttcgccggtgttgcttccatg
aacgtcacacttggtgtccctcgtattaaggaaattatcaatgctgcgaagttgatcagt
actcccatcatcagctgtaagcttgtgaccagcgatagtgaagcttcggcacgtatcgtc
aagggccgcctagagaagactttgctgggtgatattgcgtcagtcatcgaagaggcttgg
gcacctgagtacacctacatcggtatcattatcgacggtgatgccattcagaagctacag
ctggaagtcacgctcgatgacattaaatgggccattgtcggtgcaaagaaattgaaggtc
aaacaggagtccatcactgtgatcccaaggaagaaccgactacgcatatatgtcgacggc
cctgacaagtattatcgcctgcgtgatctgaagcgagtattgcctgatgtcgtcgtaaag
ggggttccgagtatacaacgtgcggtcatcaatatcaaggataaggacgatgctaaaggg
cagaagggtgaccgagaattgcttgttgaaggctacggtcttcaaaaagtgatgactacc
gagggtatcgtcggtgaatataccacttcgaaccacatcattgaagtcggcgccgtgttg
ggtatcgaggctgcacggcgtaccatcatcaacgaaatccaatacacaatggcctcccac
ggcatgaacatcgacccacgtcacattatgctgctgggcgatgtcatgacatataagggc
gaggtcttgggcatcactcgtttcggtgtggcaaagatgaaagacagcgtgctcatgttg
gcttcctttgagaagacgacggaccatctgttcgatgcttctgcctttgggaagacggat
gatatttccggcgtttcagaaagtatcattatgggtaaccctgctgcgaactgcgggacc
tcactgcctgccttgatatctcctattcctaggatcagtaaaccaaggaagctgttattc
gagggcgccttataa
DBGET
integrated database retrieval system
