Gloeophyllum trabeum: GLOTRDRAFT_72517
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Entry
GLOTRDRAFT_72517 CDS
T03130
Name
(RefSeq) ribosomal protein S5 domain 2-like protein
KO
K12587
exosome complex component MTR3
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GLOTRDRAFT_72517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtr03019
]
GLOTRDRAFT_72517
Messenger RNA biogenesis [BR:
gtr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
GLOTRDRAFT_72517
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
19308277
NCBI-ProteinID:
XP_007863499
JGI:
Glotr1_1_72517
UniProt:
S7RY01
LinkDB
All DBs
Position
Unknown
AA seq
262 aa
AA seq
DB search
MAAFDRRRINGPEESYPPVFDEDDIDDALYANWKVGQPRQGRLPGDVRPIFIRPGLINQA
NGSAYVETEKTKLVCAVYGPRQSKNTSYSEKGRLNVEVKFAPFSCKKRRAPIRDAEDRSV
AVQIHQAILPSVRLELLPKSTVDVFITIIENDGLESCYASGAIAASAALADAGIEMLGLV
MSCSSSVVGKEIWLDPTEHEARIAKGSLVFACMPALGTVTSVWQSGEVTPSEAMECMEAC
QERCTDIHAVVSEALVANARVT
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggctgccttcgaccgacgcaggatcaatgggccggaagagagctatccacctgtcttt
gacgaagatgatatcgatgatgcattatacgcgaactggaaagtcgggcagccgcggcag
ggaagactaccaggcgatgtacgtcctatatttataaggcctggtcttattaatcaagcc
aatggatcggcgtacgtagagactgagaaaaccaagcttgtctgtgctgtctatggtcct
cggcagtctaagaatacctcatacagcgagaaaggacgtctgaatgtcgaggtcaagttc
gcaccgttctcgtgcaaaaagcgtagagcgcctatacgggatgcagaagataggtccgtc
gctgtccagatacaccaggctatcctgccgtctgtacggttggaattactaccgaagtct
accgtcgacgtattcataaccataattgagaatgacgggctggagagttgttacgcgtct
ggtgcaatcgcagcaagtgcagcgctggcggatgctggtatcgagatgctgggattagtc
atgtcgtgctcgagctccgtcgtggggaaggagatctggttggatcctactgagcacgaa
gcacgcatcgccaagggcagcttggtgtttgcatgtatgccggcattaggaactgtaacc
agcgtctggcaatcaggagaggtgacccctagtgaagcgatggagtgcatggaagcttgt
caggaacgttgtacggacatacatgctgttgtatctgaagctttagtcgcgaatgcgagg
gtcacatag
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