Gloeophyllum trabeum: GLOTRDRAFT_72599
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Entry
GLOTRDRAFT_72599 CDS
T03130
Name
(RefSeq) DNA glycosylase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GLOTRDRAFT_72599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gtr03400
]
GLOTRDRAFT_72599
Enzymes [BR:
gtr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GLOTRDRAFT_72599
DNA repair and recombination proteins [BR:
gtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GLOTRDRAFT_72599
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
19308283
NCBI-ProteinID:
XP_007863522
JGI:
Glotr1_1_72599
UniProt:
S7QEQ4
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MSCPIPAGFHALPLPIVQLSLAAVLKCGQSFRWSVFPLSPTPLPLSYPSHEYRFCLKDRV
VCLRQSPDTLYYRTILPPQKDGNDDSSSEEKAQQETLAWIRDYFQLDVDLVALYNSWADR
DPVFRKFRDRFEGIRMLRQDPWENLISFICSSNNNIVRITKMITSLCDRFSPRLLSLPPP
DPYPASVSPLSPPATPSRTPSPPFSSDVLTAPNGDDLRAYHPFPSPSALASSSVAATLRT
LGFGYRAEYVQKTAQMLVGGHFLDSGNSATPDEWLRTLRDMPTTEARDALLRFMGVGRKV
ADCVLLMSLDKNEVVPVDTHVHHIAMKHYGVGSSKGKSSGKIPITPKIYDEVNAKLAQVW
GDYAGWAHSVLFTADLKSFSTYGLEAPLTSASAPSAALLGLPTLPLTPSPSQEKASRKCS
RRAAIQTARAQDAVARATTDDEVANEQAPYDLSCSLAERVKKRRRTAAPDIR
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgtcccatccctgctggattccatgctttgccgctgccgatcgtgcagttgtcc
cttgctgcagtcctgaaatgtggccagtcgtttcgctggtctgtgtttcctctgtctcct
acacccctaccactctcgtacccttcccatgaatatcggttctgcctcaaggaccgtgtg
gtctgtctcagacagtcccccgacaccttgtactatcgcaccatccttccacctcaaaag
gatgggaacgacgattcaagtagcgaagagaaagcacaacaggagactttggcctggatt
cgggactacttccagttggacgtggatttagtcgcgctgtataacagctgggcagacagg
gaccctgttttccggaagttccgggaccgatttgagggtatacggatgctgagacaggat
ccctgggagaaccttatttcattcatatgctcgtcaaacaataatatagtgcggataacc
aagatgatcacgtccttatgcgatcgtttctctccccgtcttctaagcttgcctcctccc
gacccgtaccccgcctccgtcagccccctttcccctccagcaactccatcgcgcacacct
tccccgcctttctcttccgatgtgctgactgcgccaaatggtgatgacctccgtgcatac
caccccttcccttctccttctgcacttgcctcatcctcggtggcggcgacattacgcact
ttgggcttcggataccgtgccgaatatgtgcagaagaccgcgcagatgctcgttggagga
catttcttagacagtgggaatagcgccacgccggatgaatggctgagaacacttcgtgat
atgccaactactgaagcaagggacgccttgttacgcttcatgggtgttggccggaaggtc
gctgattgtgtgctgctcatgagcttagacaagaatgaggttgtacctgtggacactcat
gtgcaccacattgcgatgaagcattatggcgtcggatcgtccaagggtaaatcaagcggg
aagatacccataacaccgaagatttacgatgaagtaaatgcgaagctcgctcaggtctgg
ggtgactacgcgggatgggctcattctgttctgttcacagccgacttaaaatcgttctcc
acctacggactcgaggcgcctctcacatccgcgtctgctccttccgcagcgcttctcggt
ctcccgacacttcctttgacaccttctccgtcccaggagaaagccagtcgaaagtgtagc
agaagagccgcaatccagactgctcgggctcaggatgcggtcgcccgtgctactactgat
gacgaagttgcgaatgagcaggcaccgtatgacctcagttgcagcctcgcagaaagggta
aagaagaggcgtcgaactgctgccccggacatacgatag
DBGET
integrated database retrieval system
