Gloeophyllum trabeum: GLOTRDRAFT_73035
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Entry
GLOTRDRAFT_73035 CDS
T03130
Name
(RefSeq) Not1-domain-containing protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GLOTRDRAFT_73035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtr03019
]
GLOTRDRAFT_73035
Messenger RNA biogenesis [BR:
gtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
GLOTRDRAFT_73035
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
GLOTRDRAFT_73035
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
DUF3819
CNOT1_TTP_bind
CNOT1_HEAT
ARM_Cnot1
NOT1_connector
Motif
Other DBs
NCBI-GeneID:
19308322
NCBI-ProteinID:
XP_007863690
JGI:
Glotr1_1_73035
UniProt:
S7RYR6
LinkDB
All DBs
Position
Unknown
AA seq
2112 aa
AA seq
DB search
MDSPSSNSNIHTIVKAQIVFLLSTLTEDNFERNQLEIRSLSEQHGIDTYLHFIRRLIVHS
QARLSGTAPPSAFDTSSALTFRLLIQETQRLARDPFLADRFRDGIDKGEGDVFRNFDLTR
FVDRVGLRPLERLVLAASIVSVPTRKELASQAQNIIRTEFDNAVLALCQHPSFDHADLSV
SQLTKLMTNLLQDPPDDSPVLDATQRQALIMAAQTKYGLDIVMPIVKRILPNLTLPPGTT
VVQALQQLGPEITEDPEIVLALFHRFGISKTNPPRDEQVIEIISTFARLATEGAVLCDVS
SVIRAINSFNLELDWPAVIKSFDRPERAVDTATLKLLITILLSAPRFEPHAVAGFWSAWE
NPMYQLRLLDALLSLPADTFNFVSLPGRRIVTVDDVANASPTIKSLAANVQGQTWNSLDL
FEVLVTHAGSESLEVHNYVREMLDKAVKISAELVHMGLLQVSQTSWNDIRLEYTQKLLAM
FLAGHPNHQLVFMRIWQIDPPYLTNAFRDFYEESPLNITRILDVAQDLKILDSLLEVRPF
TFALDVAALASRREYLNLDKWLADNVSAHGAEFLHSVIQFLDIKMESEKATRITDPAVDH
RTMPLNPQTIAIFLRVLRNSSSMLHESDVDYCLEVRNACLQIHPRLMPLTPGSDAEPGFT
VVSYSPEIEAEVDAIYKQMYDEQITIDEVIAMLQRNKASSNPRDHEIFSCMLHFLFDEYK
FFQAFYPPRELAMTGYLFGSIIQYELVDYIPLGIAIRYVLDALNCPPETNLFKFGIQALM
RFESRLSEWQPLCQALLKIPHLLEARPELVPIIQRAIANAPEGMANGTDFRVLPPVEPAP
VFTAIQPDKIEDELIVPPEETSDKILFIVNNLAPSNFDSKVTEMKEYFKDEYARWFANYL
VDQRISTEPNNHPLYLRFLDMLDGPILPKFILHETYIKSAALLNSEKTAQSSSERVILKN
VGVWLGTITLARDKPIKHKNLSFKDLLIEGYDNNRLIVVIPFVCRTLEPAAKSTVFKPPN
PWLMAIISLLAELYHFAELKLNLKFEIEMLCKSLDIDLDGIEATSVLRNRPLTESLAGPP
LPDYVPDIDALPIGGYDPASQVSEAQVLGLGPTSPSDAQRVVGAHIESLLSQLSQRVMIS
PQLPFAHNHVFKRAVQLAVDRAVREIIMPVVERSVTIAGISTRELVAKDFVTEPNEEKLR
KAGHYMAQKLAGSLALVTCKEPLKSNLTTHIRQFLLEQGFSDQLVTESVVMLLVQDNLDE
ACHAIEQAAMDRAVADVDEGFATAYELRRRHREQRTGHAFWDQTAGASSFVASLPDPLRI
RAAGVQANQMLVYEDFATDARRRVTASRPGSTVSYARTDFSSMVYPQTPVQDLPLAGARL
FTHGEAMQRFALLNQELEAFIPQMPVQSLAALPPNHDLRQIIRQIVLVTTESLEAERTAL
LVSQKIVQYLYRTQWQLAREIYVALLDQLCQNFADVAKEAITWLIYAKDDRKFNVPATLT
LLRSGLVQVQTQDEQLAKHLHVDPKIQLQNFAARLIRECLSIDPPIGSQTQWSFTIDAMD
QLSRAGEANEEVTRLLDDLRGISRLPNSTSADGLGFPVSAAKTETEQLREKLFSWFQQWV
SIYQRSPSPEKAFVPFITQLTKQGILKVEDVSSFFFRVCAESSVQMYMKCVATGDFTHAF
QALDAMARLIVYIIKYHGDASGVNNDQAKVHYLTKILSIFVLVLANMHEEQGEAFQQKPF
FRFFSSLINDLHTIEAQLGTAYFQLLIAISDTFSSLQPTYFPGFAFSWMSLISHRLFMPK
LMLHENREGWAAFHKLLLSLFKFLSPFLKTADFRLPSRDFYRGTLRLLLVLLHDFPEFLS
EYYFSLCDVIPPRCIQLRNIILSAFPPSLVLPDPHLHDVKNTLPEMRTIPPILSDFTASL
KNGDLRDILDQHLLGRGTPSTLPSLKERLRLPTVSEGASEAYNLSLINSVVMYIGVSSVA
QSKAKNGSSLFLPSDPGVVLLQYLVENLDVEGQHHILGAVVLHLRYPNAHTHWFSQLLLH
LFSEVKDSRFREVMTKVLLERFIVHRPHPWGALATFIELLSNPKYGFWNEDFVRVTPEVT
LLLESVSRSLVL
NT seq
6339 nt
NT seq
+upstream
nt +downstream
nt
atggactcgccgtcgtcgaacagcaatatacacactatagtcaaggcgcagattgtcttc
ctgttgtccacgctcacggaggacaactttgagcggaatcagcttgagatccggtcgctg
tccgagcaacatgggatcgatacgtatctccacttcatccgtcgcctcattgtccactcg
caagcgaggctgtcgggcacggcgccgccgtccgcgttcgatacctcgagcgcgctcacg
ttccgcctcttgatccaggagacgcagcgcctcgcgcgtgaccccttcctcgcggaccgc
ttccgggacggcatagacaagggcgagggtgatgtgttcaggaactttgatctcacccgg
ttcgtggacagagtgggattgcggcccctcgagcgcctggtgctcgccgcgtccatcgtg
tcggtgccaacgcgcaaggagctcgcgagccaggcacagaacataatccgcacggagttt
gacaatgctgtcttggcgctgtgccagcacccgtcgttcgaccatgcggacttgtccgtg
tcgcagctcacgaaactgatgacgaacctcctccaagatcccccggacgactctccggtt
ctcgatgcgacgcaaagacaagcccttattatggctgcacagacgaagtacggcctggat
atcgtgatgcccatcgtaaagcggatactccctaacctcacattacctcccggcacgact
gttgtgcaagcgctgcagcagcttggtccagagatcactgaagatcctgagattgtccta
gctctgttccatcgcttcggtatatcgaagacgaaccctcctcgagacgagcaggttatc
gagataatctcaacgttcgcgcgtctagcgactgaaggcgctgtcttgtgtgatgtatcg
tccgttataagggctattaatagctttaatcttgagcttgactggccggcggtcatcaag
tcgtttgatcgtccggaaagggccgtcgatactgctaccttgaagctcctgatcacgatc
ttgctaagcgctcctcggttcgaaccgcatgctgtggcgggtttctggtctgcttgggag
aatcctatgtatcagctacgtctccttgatgctctgttgtcccttcctgccgatacgttc
aacttcgtctccctgcctgggaggagaatcgtgaccgttgatgacgtagccaacgccagt
cctaccatcaaatctcttgcagccaatgtgcaaggccagacttggaactccctggatttg
ttcgaagtgctggtgactcatgccggatccgagtctctggaagtgcacaactacgtgcgt
gaaatgctggacaaggctgtaaaaatcagtgcagagcttgtccatatgggcttgttgcaa
gtctcgcaaacctcctggaacgacatccgtctggagtacactcagaaacttctcgccatg
ttcctggccgggcatccgaaccaccagctcgtcttcatgcggatctggcaaatcgacccc
ccctacctcactaatgctttccgtgacttctatgaggagagcccactcaacatcactaga
atactagatgtcgcccaagatctcaaaatattagactcccttcttgaagttcgccctttc
accttcgctctcgatgtcgctgcgcttgcctcacgcagagagtatctcaatcttgacaaa
tggctcgcggataacgtctccgctcacggtgcggaatttttgcattccgttatacagttc
ctagatatcaaaatggaaagcgagaaggcaacccgtatcactgaccccgcggttgaccat
cgtacgatgccactcaatcctcagactatcgccatcttcttgcgagtcctgcgaaacagc
tcttccatgttgcacgagagcgacgtggactactgcttggaagtccgcaacgcctgcctg
cagattcatccccgtttaatgccgctaaccccaggatcggatgcagagccaggtttcact
gtggtatcctattcgcccgaaatcgaggccgaagtggacgcgatctataagcagatgtac
gacgaacaaattactatcgatgaagtcatagctatgctccagagaaacaaggcgtcgtcc
aatcccagggatcatgagatcttctcttgcatgttgcacttcttgttcgacgagtacaag
ttctttcaggctttctaccctcctcgggagctggctatgaccgggtacctcttcggctcc
atcattcaatacgaacttgtcgactacatccctcttggcattgctattcgctatgtcctc
gatgctttgaactgccctccggagacgaacctgttcaaattcggtattcaggcgctcatg
cggttcgaatctaggttgtcggagtggcaaccgctttgccaagcgcttctgaagatccct
cacctactggaggcgcggccagagttggttcctatcatccagcgggccattgcgaatgcc
ccggaagggatggccaacggcactgacttccgtgtcctaccccctgtggaacctgctccg
gtcttcactgccattcagcccgacaaaatcgaggatgagctcattgtaccacccgaggag
acttctgacaagattcttttcatcgtcaacaatctggccccgagcaatttcgactccaaa
gtcaccgagatgaaggagtacttcaaggatgaatacgctcgttggttcgccaactacctc
gtcgatcagcgcatcagcaccgaacccaacaaccacccgttatatctccgatttctcgat
atgctggacggacccatcctgcccaagttcatcttgcacgagacctatatcaagtctgca
gctctactgaattccgagaagaccgcacaatcgagttccgagcgagtgattctcaagaac
gtcggggtatggcttggcactattacgttagcccgcgacaagcctatcaagcacaaaaat
ctgtctttcaaggaccttcttattgaaggctacgacaacaatcgcctgatcgtggtgatt
ccatttgtgtgtaggacattggaacctgcagcgaagtcgacggttttcaagccaccaaat
ccgtggctaatggctatcataagtctcctcgctgagttataccatttcgcggagttgaag
ctgaacctgaagttcgagattgagatgctgtgcaagagtcttgacatcgacctggacgga
atcgaagctaccagcgttctccgaaacaggcccttgaccgaatctttggctggtccccca
ctgccagattacgtacccgacatcgatgcgctcccaataggggggtatgaccctgcctcg
caggtttccgaagcgcaggttttgggtctagggcccactagtccctcagacgcacaacgt
gtcgtaggggcgcacatagaatctttgctgtctcaactctcgcagcgcgtgatgatcagt
ccccagctaccgtttgcgcataaccacgtgttcaagcgtgctgtccagttagctgtggac
cgggcggtgcgggagattatcatgccggtcgtggaaaggtccgtcaccatagctggtata
tcaacccgagagcttgtggcgaaggactttgtgaccgagcccaacgaagagaagctccgt
aaggcaggccattatatggctcagaagttggccgggagtttggctcttgtgacttgtaag
gagccgttgaagagtaacctcactacgcatatcaggcaattcttgctggaacaaggcttc
agtgatcaactcgttaccgagagtgttgttatgctcttggtacaggacaacctagacgaa
gcatgtcacgcaattgagcaggctgctatggaccgcgcagtggctgatgtggacgaagga
ttcgcgacggcgtatgaattgcgtcggcgccatcgggagcaacgaaccgggcatgccttc
tgggaccagacagctggtgcaagcagcttcgttgctagtcttcctgacccgcttcggatc
cgcgccgctggggttcaagcgaatcaaatgctcgtgtacgaggacttcgctacggacgcg
aggcgacgtgtcacagccagccgacctggttctactgtttcgtacgctcggactgatttc
tcgagcatggtctaccctcaaacgccggtgcaagatctcccgcttgccggcgcaaggttg
tttacacatggagaggccatgcaacgttttgctttattgaaccaggagctcgaggccttc
atcccgcagatgcccgtgcaatctttggctgcgctaccgcccaatcatgacctgcgccag
atcatcaggcagatagtcctagtcaccactgagtcactggaggccgaacgaaccgccctc
ctcgtgtcccaaaaaatcgtgcaatacttgtacaggacccagtggcagctagcacgagag
atatacgtcgccttattagatcaactgtgtcaaaacttcgcggacgttgcgaaggaggct
atcacatggctcatatacgccaaagatgaccgtaaattcaacgtaccagctaccctcact
ttgctacgcagcggcttggttcaagtccaaactcaagatgaacagctagcgaagcacctg
cacgttgaccctaagatccaattgcagaacttcgctgcccgtttgattcgagagtgcctg
tcaatcgacccgcctatcggctctcaaacacagtggtcgttcacaatcgacgccatggat
caattgtcacgggccggcgaggctaatgaagaggtcactcgactgcttgatgatctgcga
ggcatctctcggcttcctaactcaacatccgccgacgggcttggtttccctgtgtctgcg
gcgaagacggagacagagcagctgcgagagaaattgttcagttggttccagcaatgggtc
tcgatttaccaacgctcgccatcccctgagaaggcgtttgttcccttcatcacccaactc
actaagcaaggcatactgaaagtggaagatgtatcgtccttcttcttccgcgtctgcgct
gagtccagcgtgcagatgtacatgaaatgcgtcgccaccggcgattttacgcacgcattt
caagcgctggatgctatggcaagactgatcgtgtatatcatcaagtaccatggtgatgct
tcaggggtgaataacgaccaggccaaagtccattatcttaccaagatcctgtcgatcttt
gtcctagtcttggcgaatatgcacgaggagcaaggcgaagctttccagcagaagcccttc
ttccgattcttctctagcctaatcaatgatctccacaccatcgaggcacagttaggcact
gcttacttccaactgttgattgccataagtgacacgttcagttctttgcaacccacatat
ttccctggcttcgcattctcctggatgtccctcatttctcatcggttgttcatgcctaaa
ttgatgttacacgagaaccgagaggggtgggccgccttccacaaactcttactgtccctc
ttcaagttcctgtctccgttcttgaaaactgcggacttcagactgccatccagagacttc
tatcgagggacactgcggctgcttctcgtgctcttgcacgacttcccagaattcctcagc
gaatattacttcagcctctgcgatgttataccaccccggtgcattcaactgcgaaacatc
atcctcagcgccttcccgccttctttggtgctgccagaccctcatctgcacgatgtgaag
aacactttgcccgagatgcgaactataccgcctattctgtcagacttcaccgcgagctta
aagaatggcgacctccgcgatatcctggaccaacacttgcttggtcgtgggacgccgtcg
acgcttccatctctaaaggaacgattgcgtcttccaactgtatctgaaggggcctcagaa
gcttacaacttgtcgttgattaactccgtcgtcatgtacataggggtctcctccgtagct
cagagcaaagccaaaaatgggtcctctttgtttcttccgagcgaccctggtgtggttctc
ctgcaatatttggtggagaacttggacgtggaaggtcaacaccatatcctcggcgctgtt
gtattgcacctgcgatatcctaatgctcatacgcattggttcagccagcttctgctccat
ctcttctcggaagtcaaggattcgcgctttagggaggtcatgacgaaggttctcttggag
cgtttcatcgtacatcggccacatccttggggcgcactcgccacgttcattgagcttcta
agcaatccgaagtatggcttctggaacgaggactttgtccgagtcacccccgaggtcacc
ctcctcctggaaagcgtttcgaggtctttagttctctag
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