Gloeophyllum trabeum: GLOTRDRAFT_74935
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Entry
GLOTRDRAFT_74935 CDS
T03130
Name
(RefSeq) WD40 repeat-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GLOTRDRAFT_74935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gtr03041
]
GLOTRDRAFT_74935
Spliceosome [BR:
gtr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
GLOTRDRAFT_74935
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
ANAPC4_WD40
Beta-prop_DCAF4
PRP4
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
Ge1_WD40
RMC1_N
WD_LRWD1
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
19308477
NCBI-ProteinID:
XP_007865089
JGI:
Glotr1_1_74935
UniProt:
S7Q8M4
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MAELTLDTLVDDNNYLGSERARLENKAILDELERKKKARSMAVPTDDNRVKARLRELGEP
ITLFGERAADRRDRLIYVLSEIQAAKGDDAMQLDEESTEEEEEEEQEEFYTPGSLELREA
RRRLAEFSLPRAQKRVAQQRIDSKLPLGRIIDMRKKIFAEVKAFANLGSQIGDERPIAQV
RFAPNSQILATGSWSGNVKLWNIPNCTPIRTLRGHTDRVGGVAWHPEATLSQSEDAVNLV
SGAGDMNLHLWSLKSDTPLSTLKGHADRVCRVAFHPSGDYVASASFDTTWRLWDVATSKE
LLLQEGHSKEVYTVEFQDDGALVASGGLDAIGRVWDLRTGRTAMVLDGHVQAILSTSFSP
NGYQIATGAGDDTIRIWDMRSLKALYTIPAHVSNVADVRFYRNTGVPLPTKEEEEWHYRS
GSYLASAGYDGYVKLWSADDWQLLRTLSTDSSKVMSVDLSRDSKYLVSGTYNRNFQLFAP
EDVLS
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcggaactgacgctcgatacgctcgtcgacgacaacaactatctaggctctgaacga
gcacgactcgaaaataaggcaatcctcgatgagctggaacgcaagaagaaggcccggagt
atggccgtgcctaccgatgataatcgagtgaaggcacggctgcgagagctcggagagccc
attactctcttcggtgaaagagcagcagatcgtcgcgaccgtttgatatacgtcctgtcg
gagatacaagctgcgaagggcgacgatgccatgcaactggacgaggagtctacggaagag
gaggaggaagaagagcaagaggagttctacaccccaggctcactcgagctccgggaggcc
cgaaggcgattagcagagttttctctcccgagagctcaaaagcgagtcgcccaacagcgc
atagacagtaaattgcctctcggaaggataattgatatgcgcaagaagatctttgccgaa
gtgaaggcattcgccaatttaggatcacaaattggcgatgaacggcctatagctcaagtt
cgcttcgcgcccaatagccagattctagcgacaggtagttggtccgggaacgtgaagctc
tggaacatccccaattgcacgcccattcgtacgctacgaggacataccgaccgagttggc
ggagttgcgtggcaccctgaagcaactctctctcaaagcgaagatgccgtaaacttggtt
agtggcgcaggagatatgaatctccatttatggtcactaaaaagcgatacgcctctgtcc
actctgaaaggtcacgctgatcgcgtctgcagagtggcctttcatccgtcgggcgactac
gtagcgtccgcctcgttcgatacgacttggcgtctttgggacgtcgcaacatcaaaagag
ctgctcttacaggaagggcactccaaggaagtctacacagtagaattccaagacgacggt
gcgctagtagcttctggagggcttgacgcaataggccgcgtgtgggacctgaggaccgga
aggactgccatggtccttgacggccacgtccaagccatcctatcaacatctttctcgccc
aatggataccaaatagccaccggcgccggagacgataccatccgcatatgggatatgcgg
tccctgaaggcgctctacacaatcccggcacacgtctcaaacgtcgccgacgtgcgcttc
taccgcaacactggtgtgcccctccccacgaaagaggaagaggaatggcactaccggtcg
ggatcttaccttgccagtgcaggttatgacgggtacgtcaagctatggagcgcggacgac
tggcagctgctccgcaccctctcgacggattccagcaaagtcatgtctgttgacttatcg
agggactcgaagtaccttgtgtctgggacgtataaccgtaatttccagctatttgctcca
gaggatgttctaagctag
DBGET
integrated database retrieval system