KEGG   Gloeophyllum trabeum: GLOTRDRAFT_74935
Entry
GLOTRDRAFT_74935  CDS       T03130                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
gtr  Gloeophyllum trabeum
Pathway
gtr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GLOTRDRAFT_74935
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gtr03041]
    GLOTRDRAFT_74935
Spliceosome [BR:gtr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    GLOTRDRAFT_74935
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_EML ANAPC4_WD40 Beta-prop_DCAF4 PRP4 Beta-prop_WDR75_1st WDR90_beta-prop_4th NBCH_WD40 Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_WDR19_1st Beta-prop_WDR75_2nd Ge1_WD40 RMC1_N WD_LRWD1 Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 19308477
NCBI-ProteinID: XP_007865089
JGI: Glotr1_1_74935
UniProt: S7Q8M4
LinkDB
Position
Unknown
AA seq 485 aa
MAELTLDTLVDDNNYLGSERARLENKAILDELERKKKARSMAVPTDDNRVKARLRELGEP
ITLFGERAADRRDRLIYVLSEIQAAKGDDAMQLDEESTEEEEEEEQEEFYTPGSLELREA
RRRLAEFSLPRAQKRVAQQRIDSKLPLGRIIDMRKKIFAEVKAFANLGSQIGDERPIAQV
RFAPNSQILATGSWSGNVKLWNIPNCTPIRTLRGHTDRVGGVAWHPEATLSQSEDAVNLV
SGAGDMNLHLWSLKSDTPLSTLKGHADRVCRVAFHPSGDYVASASFDTTWRLWDVATSKE
LLLQEGHSKEVYTVEFQDDGALVASGGLDAIGRVWDLRTGRTAMVLDGHVQAILSTSFSP
NGYQIATGAGDDTIRIWDMRSLKALYTIPAHVSNVADVRFYRNTGVPLPTKEEEEWHYRS
GSYLASAGYDGYVKLWSADDWQLLRTLSTDSSKVMSVDLSRDSKYLVSGTYNRNFQLFAP
EDVLS
NT seq 1458 nt   +upstreamnt  +downstreamnt
atggcggaactgacgctcgatacgctcgtcgacgacaacaactatctaggctctgaacga
gcacgactcgaaaataaggcaatcctcgatgagctggaacgcaagaagaaggcccggagt
atggccgtgcctaccgatgataatcgagtgaaggcacggctgcgagagctcggagagccc
attactctcttcggtgaaagagcagcagatcgtcgcgaccgtttgatatacgtcctgtcg
gagatacaagctgcgaagggcgacgatgccatgcaactggacgaggagtctacggaagag
gaggaggaagaagagcaagaggagttctacaccccaggctcactcgagctccgggaggcc
cgaaggcgattagcagagttttctctcccgagagctcaaaagcgagtcgcccaacagcgc
atagacagtaaattgcctctcggaaggataattgatatgcgcaagaagatctttgccgaa
gtgaaggcattcgccaatttaggatcacaaattggcgatgaacggcctatagctcaagtt
cgcttcgcgcccaatagccagattctagcgacaggtagttggtccgggaacgtgaagctc
tggaacatccccaattgcacgcccattcgtacgctacgaggacataccgaccgagttggc
ggagttgcgtggcaccctgaagcaactctctctcaaagcgaagatgccgtaaacttggtt
agtggcgcaggagatatgaatctccatttatggtcactaaaaagcgatacgcctctgtcc
actctgaaaggtcacgctgatcgcgtctgcagagtggcctttcatccgtcgggcgactac
gtagcgtccgcctcgttcgatacgacttggcgtctttgggacgtcgcaacatcaaaagag
ctgctcttacaggaagggcactccaaggaagtctacacagtagaattccaagacgacggt
gcgctagtagcttctggagggcttgacgcaataggccgcgtgtgggacctgaggaccgga
aggactgccatggtccttgacggccacgtccaagccatcctatcaacatctttctcgccc
aatggataccaaatagccaccggcgccggagacgataccatccgcatatgggatatgcgg
tccctgaaggcgctctacacaatcccggcacacgtctcaaacgtcgccgacgtgcgcttc
taccgcaacactggtgtgcccctccccacgaaagaggaagaggaatggcactaccggtcg
ggatcttaccttgccagtgcaggttatgacgggtacgtcaagctatggagcgcggacgac
tggcagctgctccgcaccctctcgacggattccagcaaagtcatgtctgttgacttatcg
agggactcgaagtaccttgtgtctgggacgtataaccgtaatttccagctatttgctcca
gaggatgttctaagctag

DBGET integrated database retrieval system