KEGG   Gloeophyllum trabeum: GLOTRDRAFT_78118
Entry
GLOTRDRAFT_78118  CDS       T03130                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K14298  mRNA export factor
Organism
gtr  Gloeophyllum trabeum
Pathway
gtr03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:gtr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    GLOTRDRAFT_78118
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gtr03019]
    GLOTRDRAFT_78118
   03036 Chromosome and associated proteins [BR:gtr03036]
    GLOTRDRAFT_78118
Messenger RNA biogenesis [BR:gtr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     GLOTRDRAFT_78118
Chromosome and associated proteins [BR:gtr03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    GLOTRDRAFT_78118
SSDB
Motif
Pfam: WD40 Beta-prop_EML_2 WD40_CDC20-Fz WDR55 WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_EML WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_WDR75_1st Beta-prop_WDR19_1st Beta-prop_SPT8 WD40_RFWD3 Beta-prop_RSE1_2nd eIF2A Beta-prop_WDR19_2nd WD40_MABP1-WDR62_1st WD40_like Beta-prop_SCAP Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_IFT140_1st RMC1_N Beta-prop_VPS8
Other DBs
NCBI-GeneID: 19308776
NCBI-ProteinID: XP_007867501
JGI: Glotr1_1_78118
UniProt: S7Q3Q2
LinkDB
Position
Unknown
AA seq 353 aa
MSFFSSAVSSTAPAAAPDKDIEVAEPPSDSISSLSFSPQADYLAVGSWDNNVRVYEVGAN
GQTQGKAMYSHQGPVLGVCWNKDGTKILSGGADNAARMFDVQTGQSTQVAAHDAPVKAVR
WIETPQAGILVTGSWDKTVKYWDLRSSQPIGTVTLPERCYSLDVAYPLMVVGTAERHLCI
FNLNNPMTPHKTMQSPLKWQTRVVSCFPTSNGFAVGSVEGRVAIQYVDDKDATNNFSFKC
HRRDATPNSKDQSLVFAVNDITFHPVHGTFSTCGSDGTINFWDKDARTRLKTFEPCPGPV
TSTAFNRNGSIFAYSVSYDWSKGHSGMTPGHPNKIMLHACKEEEVKKRAVKGR
NT seq 1062 nt   +upstreamnt  +downstreamnt
atgtctttcttcagctcggcggtgtcctcgacggcgcctgccgccgcgcccgacaaagac
atcgaagttgcggagcccccgtccgattcgatatcctcgctgtcgttctcgccacaggcg
gactacctggctgtggggagctgggataataatgtgcgcgtatacgaggtgggcgcgaat
gggcagacgcaggggaaggcgatgtactcgcaccagggccccgtgttgggtgtgtgctgg
aataaggacgggacgaaaatattgtccggcggcgccgacaacgccgcgcggatgttcgac
gtgcagacggggcagtcgacgcaggtcgcggcgcacgacgcgccggtgaaggcggtgcgc
tggatcgagacgccgcaggcggggatcctcgtgacggggagttgggataagaccgtgaag
tactgggatctgcgctcgtcacagccgatcgggacggtgacgctgcccgagcggtgctac
agccttgacgttgcatacccccttatggtggtcgggacggccgagcgccacctttgcatc
ttcaacctcaacaacccgatgacgccgcacaagactatgcagtcgcccctgaaatggcag
acgagggtggtgtcgtgtttcccgacgagcaacgggttcgcggtggggagtgtcgaggga
cgtgtagctatccaatatgtggacgataaagacgcaacgaataacttctcgttcaagtgc
catcgtagggacgcaactcccaactcgaaagatcaatccctagtgtttgcagtgaacgat
atcactttccaccccgtgcacgggacgttttccacttgcggttccgatggtaccatcaac
ttctgggataaggatgcccgtacacgactgaagacctttgagccttgcccaggccccgtc
acctcgactgccttcaaccgcaacgggagcatattcgcctactccgtttcctacgactgg
tcaaaaggccactccggcatgacgccaggacacccgaacaaaatcatgctgcacgcgtgc
aaagaagaggaggtgaagaagagagccgtgaagggtcggtga

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