KEGG   Gloeophyllum trabeum: GLOTRDRAFT_80738
Entry
GLOTRDRAFT_80738  CDS       T03130                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
gtr  Gloeophyllum trabeum
Brite
KEGG Orthology (KO) [BR:gtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:gtr03009]
    GLOTRDRAFT_80738
   04121 Ubiquitin system [BR:gtr04121]
    GLOTRDRAFT_80738
Ribosome biogenesis [BR:gtr03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    GLOTRDRAFT_80738
Ubiquitin system [BR:gtr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     GLOTRDRAFT_80738
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 Sof1 WD40_Prp19 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_EML WDR55 Beta-prop_EIPR1 EIF3I Beta-prop_RIG_2nd Beta-prop_WDR19_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C NBCH_WD40 ANAPC4_WD40 Beta-prop_NUP159_NUP214 WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_RIG_1st WD40_RFWD3 Beta-prop_HPS5 eIF2A
Other DBs
NCBI-GeneID: 19309006
NCBI-ProteinID: XP_007869658
JGI: Glotr1_1_80738
UniProt: S7PW56
LinkDB
Position
Unknown
AA seq 446 aa
MVKISVLQHAPSSHLPMRRGDPTPTSRNLDPSMHPFSKARERKRALNAAKLERIFAQPFV
AALEGHIDAVEVLAKKPESLTAVASGSWDGEIILHDLARRTQLLRFNGAHKGKVSGLCWA
DEERLLSCGVDRTVKLWRATDAESSSEPLSVFPGKTVFNSIDHHRTDPLFATASNSVLIW
DETKSAPISDLTFPTSTETITSVRFNLSEPSVLASIGTDRTFTLYDIRTGKAERRTIMQM
RNNSLSWSPTFPTSVLLASEDHNLYTFDIRSMASPTQIYKAHVAAVMSCDWSPTGLEFVS
GSWDRTVRIWKEGVGRSPEVYHTKRMQRVLSTVFTSDARFVVSGSDDGNVRIWKAKAHEK
LGIITARERAAIEYRDTLKERWKHDAEVGKVQRSRHVPKPVYKAAELKRTMLEAQRVKEE
RRRKHTRAGASVPKAEKKKVVIAEQS
NT seq 1341 nt   +upstreamnt  +downstreamnt
atggtcaaaatatcggtgctgcagcatgcaccatcctcgcacttaccaatgaggcggggg
gatcctacgcccacatcccggaatctcgacccatccatgcaccccttttccaaagcgcgc
gaacgcaaacgagcgctgaacgccgcgaaactcgagcgcatattcgcccagcccttcgta
gccgcgctggaagggcacatcgatgccgtggaagtgctcgcgaagaagccggagagcttg
actgcggtcgcgagtgggagctgggacggagagattatattacatgacttggctcggagg
acgcagctgttgaggttcaatggggcgcataaggggaaagtatcagggctttgttgggct
gacgaggagagactgttgagctgcggagtggatcggactgtaaagctgtggcgtgcaaca
gatgcagagagttcctcggagccattatctgttttccctgggaagacagttttcaactca
atagaccatcaccggacagacccgttatttgccaccgcatcgaacagtgtgttgatctgg
gacgagacaaagagtgccccgatatccgacctcaccttccccacctcaaccgaaaccatc
acctccgtccgcttcaacctctccgagccctccgtgctcgccagcatcggcaccgaccgg
accttcacgctctacgacatccgcaccggcaaggcagagcgccgcacgatcatgcagatg
cgcaataactcgctgtcgtggtcgcccacgttccctacctccgtcctcctcgcgtccgag
gaccacaatttgtatacgttcgacatccggtcgatggcttcgccgacgcagatttacaag
gcgcatgtagccgctgtgatgtcgtgcgactggagcccgactggcctcgagttcgtgagc
ggcagctgggaccggacggtcagaatatggaaggagggtgtgggcaggtcgcccgaggtg
taccacacaaagcggatgcaaagagtgctgtcgacggtgttcacctccgacgcgcgtttc
gtggtgtccggctcggacgacggcaatgtgcgcatctggaaagcgaaggcgcacgagaaa
ctcgggatcatcaccgcgcgcgagcgcgccgcgatcgagtaccgcgacacgctcaaggag
cggtggaagcacgacgcggaggtcgggaaggtacaaaggagccgccatgtgccgaagccg
gtctacaaggccgccgagctcaagcggacgatgttggaggcacagagggtcaaggaggag
cgcaggcggaagcatacgagggcgggggcgagtgtgcccaaggcggagaagaagaaggtg
gtcattgcagagcagagctag

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