Gloeophyllum trabeum: GLOTRDRAFT_80738
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Entry
GLOTRDRAFT_80738 CDS
T03130
Name
(RefSeq) WD40 repeat-like protein
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
gtr
Gloeophyllum trabeum
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gtr03009
]
GLOTRDRAFT_80738
04121 Ubiquitin system [BR:
gtr04121
]
GLOTRDRAFT_80738
Ribosome biogenesis [BR:
gtr03009
]
Eukaryotic type
90S particles
Other 90S particles
GLOTRDRAFT_80738
Ubiquitin system [BR:
gtr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
GLOTRDRAFT_80738
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
Sof1
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WDR55
Beta-prop_EIPR1
EIF3I
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
NBCH_WD40
ANAPC4_WD40
Beta-prop_NUP159_NUP214
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_RIG_1st
WD40_RFWD3
Beta-prop_HPS5
eIF2A
Motif
Other DBs
NCBI-GeneID:
19309006
NCBI-ProteinID:
XP_007869658
JGI:
Glotr1_1_80738
UniProt:
S7PW56
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MVKISVLQHAPSSHLPMRRGDPTPTSRNLDPSMHPFSKARERKRALNAAKLERIFAQPFV
AALEGHIDAVEVLAKKPESLTAVASGSWDGEIILHDLARRTQLLRFNGAHKGKVSGLCWA
DEERLLSCGVDRTVKLWRATDAESSSEPLSVFPGKTVFNSIDHHRTDPLFATASNSVLIW
DETKSAPISDLTFPTSTETITSVRFNLSEPSVLASIGTDRTFTLYDIRTGKAERRTIMQM
RNNSLSWSPTFPTSVLLASEDHNLYTFDIRSMASPTQIYKAHVAAVMSCDWSPTGLEFVS
GSWDRTVRIWKEGVGRSPEVYHTKRMQRVLSTVFTSDARFVVSGSDDGNVRIWKAKAHEK
LGIITARERAAIEYRDTLKERWKHDAEVGKVQRSRHVPKPVYKAAELKRTMLEAQRVKEE
RRRKHTRAGASVPKAEKKKVVIAEQS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaaatatcggtgctgcagcatgcaccatcctcgcacttaccaatgaggcggggg
gatcctacgcccacatcccggaatctcgacccatccatgcaccccttttccaaagcgcgc
gaacgcaaacgagcgctgaacgccgcgaaactcgagcgcatattcgcccagcccttcgta
gccgcgctggaagggcacatcgatgccgtggaagtgctcgcgaagaagccggagagcttg
actgcggtcgcgagtgggagctgggacggagagattatattacatgacttggctcggagg
acgcagctgttgaggttcaatggggcgcataaggggaaagtatcagggctttgttgggct
gacgaggagagactgttgagctgcggagtggatcggactgtaaagctgtggcgtgcaaca
gatgcagagagttcctcggagccattatctgttttccctgggaagacagttttcaactca
atagaccatcaccggacagacccgttatttgccaccgcatcgaacagtgtgttgatctgg
gacgagacaaagagtgccccgatatccgacctcaccttccccacctcaaccgaaaccatc
acctccgtccgcttcaacctctccgagccctccgtgctcgccagcatcggcaccgaccgg
accttcacgctctacgacatccgcaccggcaaggcagagcgccgcacgatcatgcagatg
cgcaataactcgctgtcgtggtcgcccacgttccctacctccgtcctcctcgcgtccgag
gaccacaatttgtatacgttcgacatccggtcgatggcttcgccgacgcagatttacaag
gcgcatgtagccgctgtgatgtcgtgcgactggagcccgactggcctcgagttcgtgagc
ggcagctgggaccggacggtcagaatatggaaggagggtgtgggcaggtcgcccgaggtg
taccacacaaagcggatgcaaagagtgctgtcgacggtgttcacctccgacgcgcgtttc
gtggtgtccggctcggacgacggcaatgtgcgcatctggaaagcgaaggcgcacgagaaa
ctcgggatcatcaccgcgcgcgagcgcgccgcgatcgagtaccgcgacacgctcaaggag
cggtggaagcacgacgcggaggtcgggaaggtacaaaggagccgccatgtgccgaagccg
gtctacaaggccgccgagctcaagcggacgatgttggaggcacagagggtcaaggaggag
cgcaggcggaagcatacgagggcgggggcgagtgtgcccaaggcggagaagaagaaggtg
gtcattgcagagcagagctag
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